Saccoglossus kowalevskii (acorn worm): 100376440
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Entry
100376440 CDS
T04123
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100376440
03036 Chromosome and associated proteins [BR:
sko03036
]
100376440
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sko03037
]
100376440
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100376440
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100376440
UBL E3 ligases
100376440
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100376440
Cilium and associated proteins [BR:
sko03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100376440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
Baculo_IE-1
PWI
zf-RING_6
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100376440
NCBI-ProteinID:
XP_002739463
LinkDB
All DBs
Position
Un
AA seq
1112 aa
AA seq
DB search
MASKRKLRSIRKKPAQFQEEEPMDMSPDSTPKSQHSTCSKREKKKTSTKASSPTHSDGSK
SPENNCSICLGKFENKSFTDGCFHTFCFVCIMEWSKVKATCPLCKTSFKSIIHNIKSNEM
YDQYFLSSSRSNTLSDEITRQRFRYSTTLASVRDRALAQQRRQLPSTRANTRAYREQREA
AAIERRRQVYALGLRAQTESSMRRTCYRDISSTFFQQNAACLHRLVPWLRRELNVLFQNN
EDLVMFMINLILSYIPVMDMEGPEFFDNLRPFMYHRTEQFIRELVNFARSPYDMNGYDQH
TQYDFLSNHQSPESPVSARHQTNSRSVPLIDLSDVSSDSSDGVMPLALDYSGHTSVSTIT
TDDQPSTSSMAVKNELSETHNPEPPSDNDSSDEVMFVGFVKSISERSPDAIITLSSDSDK
EGKNSREIAKTVKSKQKLKNSEKSTSKSRKGRTRSKRDRSYDRYRSCSSSQDRNRNRSSS
HSDESHRNRYLDNRNKPGGKRKRKTKHVEAPHYEYVRYHGSRGAYTYFSSDSDSDHEPSR
NYYFSSKSFRPTHNRYSRSRSRSRSPLWTSQRQYRSRGRASYHAHDLDRSSNSSAYSRHS
HSSVMSSYSSSRFQRTRGCSRSRSRSRSPRSFRRKHRHRSSSVEFMGSFSRQEPLKDIYT
LKQKSLYHKKRHTTRYTSDSDIEVTYERKENHYKDKSKKRKKHGKHKRKHKHKSKKHRRD
KERHRNAETCLVKLSDTESNTTEPAANSENKREIERVGSSGPNSSSEDKNKEIEIDVLEV
TNEEQHEDESVGSAVDTNGEQLPHEPGDSNTAESRIIDEPGDANVSNIADEPGDTNTAES
SITDEPGDSNTAVSSITDEPGDSNSAESSKADKPGDSDIAVSSIAGSNSGEQLPDEPGNS
NTAESSITDEPGDSNTAVSSITDEPGDSNSAESSKADEPGDSDIAVFSIAGSNSGEQLPG
EPGNTNTTVPSITDVPGDTNTAVPSISGFNSGKQLPDKPGDFNITEPSIAGSGSDMSSDV
LMSQQDLSMNVLSTTESQQNSDGIQLHSKDIIAELLGDLSTRTNSDCESEKDSQVGEHNP
DVTAFDLLVQAERKRLKQLEMSNLLSDACDSD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaaaggaagttgcgttctatcagaaagaaacctgcacaatttcaagaggag
gaaccaatggacatgtcgcctgatagtactccaaaatcacagcatagtacatgcagtaaa
agggagaaaaaaaagacttccaccaaggctagctcaccaactcatagtgatggatctaag
tcacctgaaaataactgttccatctgtcttggaaagtttgagaataaatcgtttaccgat
ggttgttttcacacgttctgctttgtatgcatcatggaatggtctaaagttaaagcgaca
tgtccattgtgcaaaacatccttcaaatcgattattcataacattaaatccaatgagatg
tatgatcaatactttctttcatcatctagaagtaatacactcagtgatgaaattaccagg
cagcgtttcagatatagtacaactcttgcttctgtacgagacagagcactggctcaacaa
agacgacaattgccttccactcgagcaaacactcgtgcttatagagaacagcgtgaggca
gctgctattgaaagacgaagacaggtctatgctcttggtttacgagcacagactgaatcg
tctatgagacgtacttgttacagggatatatctagcacattttttcagcagaatgcagcc
tgtttgcatcgattggtgccatggttgaggagagaactcaatgtcttgtttcagaataat
gaagaccttgttatgtttatgataaacctaatcttgtcatacatccctgtcatggacatg
gagggccctgaattttttgacaacctcagaccatttatgtatcacagaactgagcagttc
attcgagaactagtaaactttgcaagatcgccctatgatatgaatggttatgatcaacac
acacagtatgatttcctttccaatcaccagtcaccggaaagccctgtctctgccagacac
caaactaattcgagatcagtgccactcattgatttatctgatgtttcaagtgatagctcg
gatggtgtgatgccactagctttggattattcaggtcatacatccgtgtctaccattacc
acagacgaccaaccttctacttcaagtatggccgtgaaaaacgaactttcagaaactcac
aatccggagcctccaagtgacaatgatagctctgatgaagttatgtttgttggttttgtc
aaatccattagcgaacgctctccagatgcaatcataacgttgtcctctgattccgacaaa
gaagggaaaaacagtagagaaatcgcaaagacagttaaatcaaagcaaaagttaaaaaat
tcagagaaatctacaagtaaaagtaggaaaggtagaacacgtagcaaaagagataggagt
tatgatagatacaggagctgtagttccagtcaagacagaaatcgaaatagaagtagtagc
cacagtgatgaatcacatcgcaataggtaccttgacaacagaaataaaccagggggtaaa
agaaaacgaaaaacaaaacatgtggaagcacctcattatgaatatgtacgatatcatgga
tctcgtggtgcgtacacttatttttcatctgattctgattctgatcatgagccatcaaga
aattattacttttctagtaaatcatttaggcctacacataataggtacagtcggtccagg
tctaggtcaaggtctccactctggactagtcaaagacagtacagatcaagaggtagagca
tcgtatcatgctcatgatttagatcgctctagtaatagctctgcttacagtcgacattca
cattcctccgtcatgtcatcatattcaagttcacgttttcagagaactagaggttgttcg
cgttcacgctctcggtcaagatctcccaggtctttcaggcgtaagcatcgtcaccgcagc
tctagtgttgagtttatgggttcatttagcagacaggaacccctgaaagacatttacaca
ttaaaacaaaaaagcttataccacaagaaacgacataccactcgatatacaagtgactca
gatattgaagtcacatatgaaagaaaagagaatcactataaggacaagagtaagaaaaga
aaaaaacatggtaaacacaaacgaaaacacaaacacaaaagcaagaaacacagacgtgac
aaggagagacataggaatgctgaaacatgtctagtaaaactctcggatacagagagcaat
acaacagagccagctgcaaacagtgagaacaaacgagaaattgaaagggtgggttcttct
ggtcctaacagttcatcggaagataagaataaagaaattgaaattgatgtactggaagtg
accaatgaagagcaacatgaggatgaatctgtagggagtgcagttgatactaatggagaa
cagctaccacatgaacccggagattccaacactgctgagtccagaataatagatgaacca
ggtgatgccaatgtgtccaacatagcagatgaaccaggagataccaacactgctgagtcc
agcataacagatgaaccaggtgattcaaacactgctgtgtccagcataacagatgaacca
ggtgattccaactctgctgagtccagcaaagctgacaaaccaggagattctgacattgct
gtgtctagtatagcaggatctaactctggagaacagctaccagatgaaccaggaaattcc
aacactgctgagtccagcataacagatgaaccaggtgattcaaacactgctgtgtccagc
ataacagatgaaccaggtgattccaactctgctgagtccagcaaagctgatgaaccagga
gattccgacattgctgtgttcagcatagcaggatctaactctggagaacagctgccaggt
gaaccaggaaataccaacactactgtgcccagcataacagatgtaccaggtgataccaac
actgctgtgcccagcatatccggatttaactctggaaaacagctacctgataaaccagga
gatttcaacattactgagcccagtatagctggatctggctctgatatgtcatctgatgtc
ttaatgtcacagcaagatttgtcaatgaatgtgttgtctaccacagagtcccaacagaat
tctgatggtattcaactgcattctaaggatataattgcagaactgttaggagatttaagt
acaaggacaaacagtgattgtgagtctgaaaaggacagccaagtaggggaacacaaccca
gatgtcacagcgtttgatttgttagtgcaggcggagagaaaaagactcaaacagctggaa
atgtcaaacttgttatcagatgcatgtgacagtgattag
DBGET
integrated database retrieval system
