Saccoglossus kowalevskii (acorn worm): 100376610
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Entry
100376610 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17-like
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100376610
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100376610
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100376610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100376610
NCBI-ProteinID:
XP_002731189
LinkDB
All DBs
Position
Un
AA seq
670 aa
AA seq
DB search
MSRFDRDRSYDSSSRSDRRGFGPPGRGGRGGGSSHQFGSGFNGPPRFGGRGGGGMGGKSN
SQPGEKLRKIKWDLESLPRFEKNFYREHPDVARREQHELEAFQNEKQITTKGRGVPKPVF
HFGECSFPDYILATVKRNNFKEPTAIQAQGWPMALTGRDVVGIAQTGSGKTIAYMLPAIV
HINHQPFLDRGDGPICLVLCPTRELAQQVAHVAVDFGKSSRIKNTCVYGGAPKGSQIRDL
ERGVEICIATPGRLLDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ
VLMWSATWPKEVRGLAEDFLKDYLQVNIGALSLSANHNILQIVDVCQEHEKDDKLIRLLE
EIMQENENKTLIFVETKKRTDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRAGNAPI
LLATDVASRGLDVTDIKFVINFDYPSSTEDYIHRIGRTARSERTGTAYTFFTAGNMKQAP
ELIDVLREANQVINPKLINMAEAARKSFGGRGGRSRYRTSGSFGGGSRDKPGFKQGFKSY
GSQGGSRGGGYGGSDRQGGSKSYGQGGQSSRAPYNRGGQKHGGYGQSYGQNGSSQSSYGS
GGSSSQQSAPTPLLGQMNGYNSSSASAPSSTSQSSNTQSQQYGNIQQQYQAYAMQYAAYQ
QQQQSQQPAQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttttgaccgtgaccgatcctacgattcttccagtcggtctgacaggagagga
tttggtcctcctggtagaggcggaagaggtggtggcagcagtcatcagtttggtagtgga
tttaatggtccaccacgatttggtggtcgtggaggaggtggcatgggtggtaagagcaat
agccagcctggggagaaactgagaaaaatcaagtgggatttggaaagtttgcctcgtttc
gagaagaatttttacagagaacaccctgatgttgccagaagagaacaacatgaacttgaa
gcattccagaatgaaaaacagataacaacaaaaggacgaggtgttccaaaaccagtattc
cattttggggaatgttctttcccagactatatcctggctactgtcaaaagaaataatttc
aaagagccaacagcaattcaagctcaaggttggcccatggctttgactggacgagatgtg
gttggtattgctcagactggatctggcaagactatagcttacatgttgccagctattgtt
catatcaaccaccagccattcttggaccgtggagatggaccaatttgtttggtgttatgt
ccaacaagagaattggctcagcaagtagcccatgttgctgttgattttgggaaatcttcc
agaataaagaatacttgtgtttatggtggagctccaaaaggatcccagattagagatctt
gagagaggagttgaaatttgtattgccactcctggtagattactcgacttcttggaggca
ggaaagacaaacttgaggaggtgcacatacttggtacttgatgaggccgacagaatgttg
gacatgggttttgaacctcaaatcagaaaaattattgagcagattagacccgacagacag
gtactaatgtggagtgccacttggccaaaagaagtaagaggactggcagaagactttcta
aaagattatcttcaagtaaatattggtgcattatccttgtccgccaatcacaatattctg
cagattgttgatgtttgtcaagagcacgagaaagatgacaagctaataagactgttagaa
gaaatcatgcaagagaatgagaacaaaacgctgatctttgttgagaccaaaaaaagaaca
gatgacttaactcgaagaatgagaagagatgggtggcctgctatgtgtattcatggtgac
aaatcgcagcctgaacgagactgggttctcagtgaattcagagcaggaaatgctcctatt
cttctagctacagacgttgcatcacgtggcttagatgtgacagacatcaaatttgtgata
aactttgattatccaagttcaactgaggactatattcatcgtattggacgtactgctcga
agtgagcgtacaggtactgcatatacattcttcactgctggcaatatgaagcaagccccc
gagttgattgatgtcctacgagaggctaaccaagtgattaatccaaagttgatcaatatg
gccgaggcggccagaaagtcatttggtggcagaggtggtcgtagtcgctacaggacatct
ggttcttttggaggtggtagtcgcgataaaccagggttcaagcaaggattcaagtcttat
gggagccaaggggggtctagaggtgggggttacggggggtcggatcgccagggtggttca
aagagttatgggcaggggggacaatccagtagggcaccatacaacagaggtggtcagaag
catggagggtatggtcaaagttatggacagaatggtagttctcaaagcagttatgggtct
gggggatcaagttcacaacagagtgctccaactccattgcttggtcaaatgaatggttat
aattccagcagtgcatctgctccatcctctacttctcagtcgtctaatacgcagtcacaa
cagtatggtaatatccagcaacagtaccaagcatatgccatgcagtacgccgcttatcaa
cagcaacagcaatctcaacaacctgcgcagtag
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