Saccoglossus kowalevskii (acorn worm): 100376707
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Entry
100376707 CDS
T04123
Name
(RefSeq) DNA damage-binding protein 2-like
KO
K10140
DNA damage-binding protein 2
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03420
Nucleotide excision repair
sko04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100376707
09124 Replication and repair
03420 Nucleotide excision repair
100376707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100376707
03400 DNA repair and recombination proteins [BR:
sko03400
]
100376707
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100376707
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100376707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100376707
NCBI-ProteinID:
XP_002731345
LinkDB
All DBs
Position
Un
AA seq
476 aa
AA seq
DB search
MPRRTRGKSLKRLRSCENGADQSESTTPARKYAAVNDERTKICSGASTRKTIPAISVTPL
IGNNSHNLVHHIYNTSFGRMSQHTMRKSFCQPFVHILSNAKVYRTASPFDRRVTALEWHP
THPTVLAAASKCGDMILWDYERTDKQEFISGTGKGDAITGLKFNVDDPNTVYTSSVFGKI
SLQDFTGRQSKILLESDDWIRNWYCALDVSFTTGLVTVGDSVGNALLLSREGKVLWNHKL
HKQKITHCEFNPQCDWLLVTSSVDKTVKLWDVRMIKGKDSVVHVLNHEKPVNSAYFSPDN
NRLLTTDQYSEIRVYHSPDWSRVMKTILHPHRFFQHITAFKATWHPMCDLIVVGRYPDEK
FPGYIPNETRSIDVIDVNTGDIVCQIKDSKAPGLISLNKFSHGGDVLASSMGVNILIWHK
NVDIERKQQAMMEEMRLSGVKPNEVTESQNRRRPQQRSTRIDAAMKSKIAAKLRKQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaagaacacgaggaaagtcattgaagagattgaggtcttgtgaaaatggtgca
gatcaatcggaaagtacaactcctgcaagaaaatatgctgctgtaaatgatgaaagaaca
aagatttgcagtggtgcatctacgagaaaaacaatacctgcaataagtgttactcctctc
attggtaataatagtcacaatcttgttcatcatatctataatacatcattcggtagaatg
tcacaacatacaatgagaaagagtttttgtcagccattcgttcatattctctccaacgct
aaagtatacagaacagcgagtccatttgataggagggtcactgcgcttgagtggcatcct
acacatccgactgtcttagccgccgcttccaaatgtggtgatatgatactatgggactat
gaaagaacggacaaacaggaattcatctcagggactggcaaaggcgacgcaattactggt
ttgaagttcaatgtcgacgatcccaatactgtctatacatccagtgtgtttggtaaaatc
agcttacaggatttcactggaagacaatctaaaatattattagaatcagacgactggatt
cgtaattggtattgtgcacttgacgtgtcatttacgactggtctggtaaccgttggtgac
agcgtgggcaatgctttattgcttagtcgcgaaggtaaagtgctttggaaccataaactt
cataaacagaaaatcacgcactgtgaattcaatccccaatgtgattggctgctggtgaca
tcatcagtcgacaaaacagtgaaattatgggatgtacgtatgataaagggtaaagacagt
gttgtacatgtgttgaaccatgaaaaaccagtgaactcagcatattttagtccagacaac
aataggctactaacaacagaccagtacagtgagatacgtgtataccattcacctgattgg
agtagagtaatgaaaacaatcttgcatccacacaggttttttcagcatattacagctttt
aaggcaacatggcatcctatgtgtgacctgatagttgttggaagatatccagatgagaaa
tttcctggctacattcccaatgaaactcgtagtattgacgtcatcgatgtaaacacagga
gatattgtttgtcaaataaaagacagtaaagcgccaggtttaatatcgttaaataagttc
agtcatggtggagatgtattggcctcctcaatgggtgtgaatatcttaatttggcataaa
aatgtagacatagaacgcaaacaacaagcaatgatggaagaaatgcgactaagtggcgta
aaaccaaatgaagtaacagaaagccaaaacagaagacgaccacaacaaaggtccaccaga
atagatgctgcaatgaaatctaagattgctgccaaactaagaaaacaatga
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