Saccoglossus kowalevskii (acorn worm): 100376751
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Entry
100376751 CDS
T04123
Symbol
EIF4A3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
sko03015
mRNA surveillance pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100376751 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
100376751 (EIF4A3)
03015 mRNA surveillance pathway
100376751 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100376751 (EIF4A3)
03041 Spliceosome [BR:
sko03041
]
100376751 (EIF4A3)
03009 Ribosome biogenesis [BR:
sko03009
]
100376751 (EIF4A3)
03012 Translation factors [BR:
sko03012
]
100376751 (EIF4A3)
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100376751 (EIF4A3)
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100376751 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
100376751 (EIF4A3)
Spliceosome [BR:
sko03041
]
Complex C
Other components
EJC/TREX
100376751 (EIF4A3)
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
Helicases
100376751 (EIF4A3)
Translation factors [BR:
sko03012
]
Eukaryotic type
Initiation factors
eIF-4
100376751 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
DUF1833
Motif
Other DBs
NCBI-GeneID:
100376751
NCBI-ProteinID:
XP_002741112
LinkDB
All DBs
Position
Un
AA seq
398 aa
AA seq
DB search
MARRVLTSEAVNVEFETSEEVQVTPTFDNMGLREDLLRGIYAYGFEKPSAIQQRAVRPVV
KGRDVIAQAQSGTGKTATFSISILQTLDTQVRETQALILSPTRELAVQIQKVILALGDYM
SVQCHSCIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEML
NKGFKEQIYDVYRYLPPATQVILFSATLPHEILEMTHKFMTEPIRILVKRDELTLEGIKQ
FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQ
KERDAIMKEFRSGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRYGR
KGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgtgtgttgacttctgaggcggtgaatgtcgagtttgaaacaagcgaagag
gtccaggtgaccccaaccttcgacaatatgggtcttagagaagaccttcttcgagggatc
tacgcgtacggttttgaaaaaccttcggccattcaacagagagctgtcagaccagttgtg
aaaggtcgagatgttatagcacaggcacagtcgggtactggtaaaacagcaacattttca
atatctatcctgcagaccttagatacacaggttagagaaacgcaggcacttattttgtca
cccacaagagaactggctgtgcagatacaaaaagttattttagcattgggtgattacatg
agtgtgcagtgtcattcctgtattggaggaacaaatatcggtgaagatatcagaaaatta
gactatggtcaacatgttgtgtcgggtacacctggaagagtgtttgacatgatcaggcga
cgtaatctacgaactcgagcaatcaagttgttagttttagatgaagcagatgaaatgtta
aacaaaggttttaaagaacagatctatgatgtgtatcgttacctgccgccagcaacacaa
gtgatattgttcagtgctacactgcctcatgaaatacttgagatgactcacaagtttatg
acagagccaattcgtatattagttaaacgtgatgaattgacgttggaaggaatcaaacag
ttctttgttgcggtcgagagggaagaatggaaatttgatacactttgtgatctttacgac
acattaacaatcacacaagctgttattttctgcaacacaaaaagaaaggttgattggttg
acagaaaagatgcgagaggctaatttcacagtgtcttcaatgcatggtgatatgccacag
aaagaaagagatgcaatcatgaaggagttcagatcaggagccagtcgagtgttgataacg
actgatgtatgggctcgcggtattgatgtacaacaggtatcactggtcatcaactacgat
ctgccaaacaatcgtgagttgtacatacacaggattggacgttctggtcgatacggccgt
aaaggtgttgctatcaactttgtcaaaagtgatgatattcgtatcttgagagatattgaa
cagtattacagtacacagattgatgaaatgcctatgaatgttgctgatctgatctaa
DBGET
integrated database retrieval system
