Saccoglossus kowalevskii (acorn worm): 100377093
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Entry
100377093 CDS
T04123
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04150
mTOR signaling pathway
sko04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100377093
04150 mTOR signaling pathway
100377093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
100377093
Membrane trafficking [BR:
sko04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100377093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
SoxE_N
DcuC
Motif
Other DBs
NCBI-GeneID:
100377093
NCBI-ProteinID:
XP_006822699
LinkDB
All DBs
Position
Un
AA seq
1609 aa
AA seq
DB search
MVRVCIFGSILALIRGEPLLLYANRQDVRMVDTGTNPPNDTIIISGLEDAAALDFYHNEK
IVFWTDVSLEMIKRTFVNGSRIVENIITTGLVSPDGLACDWLGKKLYWTDSETNRIEVSN
LDGSSRKVLFWEDLDQPRAIALDPHRGWMYWTDWGETPKIERAGMDGIEREVIVQTDIYW
PNGLTIDYDAQRIYWADAKLNYIHHANFDGSDRSPVAEGSLPHPFALTLFTDTLFWTDWH
TRSIHSCHKNTGENRKVVHEDIFSPMDIHVYSAVRQPSGANPCGQNNGDCSHLCLMSPHP
PKYTCACPTGVRLLTNGRTCADGAEEILLLARRTDLRRISLDTPDYTDVVLQLEDIQHAI
AIDYDPVDGYIYWTDDEVRAIRRASMDGTGGEFIVTTEVEHPDGLAVDWVGRNLYWTDTG
NDRIEVARLNGTSRTILISEDLDEPRAIALDPADGYMYWTDWGSKPKIERAALDGTDRTV
LINSSLGWPNGIALDFIERKIYWGDAKTDKIEMANMDGTGRQVLVVDLPHIFGFSLLGDY
IYWTDWQRRSIERVNKHNGQDREVIIDQLPDLMGLKAVNVKKIEGTNVCAHDNGGCSHLC
LYRPIGVICACPIGLELLQDQKTCIVPEAFLLFSRRADIRRISLETNNNDVVIPLAGVKE
AAALDFDINDNRIYWSDIRRKAISRAFMNGSSLEHVIEFGLEYPEGMAVDWVAHNIYWAD
TGTNRIEVARLDGSARRVLLWQDLEEPRALALDPSEGFMYWTDWGGNPKIERANMDGSNR
KLIVTDVGRTNGLTIDYSDRRMYWTDLDMNQIESADLMGQHRRSVIGEKLPKPFGLTQYQ
DYIYWTDWATRSIERVNKTSGENRTRIQGQLDYVMDILVFHASRQSGSNQCALNNNGCEY
LCFADPPNLIGELQSHCACPTHYTLREDNKTCSPPESFLLYSQRNLISRMTVNLDDSPDI
VLPIHGLRIVKAIEYNYKTKQIYWVDGRTKTIKRSYDNGLEPETFLPNPGDEPKFHPHDL
ALDPYSGLIYWTCSQTNVINVTRLDMTEVGVVIRDDTEKPRAIVLDPERGYMYWTSVSQN
KPRIMRAAMDGADKTVIISSSLSEPEALAIDTESNKLFWSDVTLHRIESSDLNGGNRNVL
VDSQLSTPHALTIFGTHLYWIDKDSMLIERVDKINGDQREKILGRLTQLSDIHAVRNNYP
SADSHPCAINNGGCSHICFLVDGVKTCACPIDLVLSDSRTTCGEPPTCSPDHFTCKSGNI
ECIPQAWVCDTIPECADESDEQNCPTCSKLQFHCKSGQCIDKKLRCNGEPDCNDESDEKF
CQAPCWKDQFECSNGQCVDSELAECNDIIECDDGSDEVNCDHHSVVEPNTSPVRSAGSMH
SLIGAVVGFIFVIIVIGIAMWWWRRYKLQPDSMCDNQFVMLNNHQNNYTAMVGVGPQQTT
PPRSISGISKCHTKSINTCLSVSTVPAGSNVQHYDRSHVTGASSSGSSMGSHYPKETLNP
PPSPVTERSHYTAELYYPSHSPHASRSYRHYKSRNIPPPPTPCSTDVCEDSEPYSRPNKR
KYYSNPYPPPPTPQSVLSDNYESCPPSPSTERSFCNPYPPPPSPATDSP
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtgtttgtatttttggttccattttggcgttgattcgtggagaaccgctgtta
ctgtacgccaaccgacaagatgttagaatggtggatacgggcacaaatcccccgaatgac
acaatcattatcagcgggctggaagatgctgcagcactagacttttaccataacgagaaa
atagttttttggactgatgtcagcttagagatgataaaacgaacatttgtgaatggatca
cgtattgtggagaatattatcacaacaggcttagtttcgcctgatggactagcctgtgat
tggctcggtaaaaaactttattggacagattccgaaactaatcgcattgaagtgagcaac
ctggatggaagctcaagaaaagttttattctgggaggacctagaccaacccagggctatt
gcattagatccacacagagggtggatgtactggacagactggggagaaacgccaaagatt
gaaagggccgggatggacggaatagagcgggaagttattgtgcagactgacatttattgg
ccgaatggcctaacaatagactatgatgcgcagaggatatactgggccgatgcaaaactt
aattatatacatcatgcaaactttgacggttcagatcgttcaccggtggcggaaggatca
ttacctcacccatttgcattaacgttatttacggatactttgttttggactgattggcac
acaaggtctattcattcgtgtcataaaaatacaggcgagaacaggaaagttgtgcatgaa
gatatcttttcaccaatggatattcacgtttattcagcggttcggcagccttcaggggcc
aatccttgtggtcagaacaatggtgattgttcacacttgtgtttgatgtcgccgcatccg
ccaaagtatacatgtgcgtgtcccactggagtgaggctgctaacaaatggcagaacgtgt
gctgacggagctgaagaaattctattactcgccagacggacagatcttcgcaggatatct
cttgacacgcctgactacacagacgttgttttacaattagaagatatccaacatgctatc
gcaatagattatgatccagtggatggttacatttattggacagatgacgaagtgagggcg
attagacgagcatccatggatggtacaggtggtgaatttattgtgactaccgaggtggag
catccagatggattggctgtagattgggttggcaggaatttgtattggactgatacgggc
aatgacagaattgaagttgctagacttaatgggacgtcgcggacaatattgatttccgaa
gatttagacgaaccaagggcaatagctttagatccagcagacgggtacatgtactggaca
gactggggaagcaagccaaaaatcgaacgtgctgctcttgatggaacagacagaactgtg
ctcattaattcatccttgggatggcccaacggaattgcattagactttatagagaggaaa
atatactggggagatgcgaaaactgataaaattgaaatggcaaacatggatggcacagga
agacaagtactggtagttgatttacctcacatttttggttttagcttgcttggtgactac
atatattggactgactggcagagaagatccattgagagagtcaacaaacacaatggacaa
gaccgagaagttattattgaccagttgcctgatttaatgggtctgaaagctgttaacgta
aagaaaatagaaggtaccaatgtatgtgctcatgacaatggcggatgtagccacctctgt
ttataccgaccaattggtgtgatatgtgcctgtccaattggtttagagctgctccaagac
cagaaaacctgcatcgtacccgaagcgtttctccttttttccagacgtgccgatattcga
cgcatttctcttgagactaacaataatgatgttgttattccgctggctggtgtcaaggaa
gcggctgcattggattttgatatcaacgataatcgaatttactggtccgatattagacgg
aaggcaatcagtcgtgctttcatgaatggtagttcattagagcatgtgattgagtttggc
ctagaatacccagaaggcatggcagttgattgggtagcccataatatttactgggctgat
acaggaacaaatcggatagaagtggcaagactggatggatctgccagaagagtactgctt
tggcaagatttagaggaacccagggcattagcgttagatccaagtgaaggctttatgtat
tggacggactggggtggcaatcccaagattgaaagggccaatatggatggcagtaaccga
aagctgattgtgacagacgtgggtcgcactaatgggctgacaattgattacagtgatcgc
agaatgtactggactgatcttgatatgaaccaaattgaatcagcagatttgatgggtcaa
cataggcgttcagtaattggggaaaaactaccaaagccattcggattgactcagtatcaa
gactacatctattggactgactgggcaacacgcagtattgaaagagtaaataaaaccagt
ggtgaaaatagaactcggattcaaggacagttggactatgttatggacatcttggtgttt
catgcgtcaagacagtctgggtctaaccaatgtgcattaaacaacaatggatgcgagtat
ttatgttttgctgaccctccaaatttaatcggtgaacttcaatctcattgtgcctgtccc
acgcattacacattgcgagaagataataaaacatgttcaccacctgagtcgtttctactg
tacagtcaacgcaacctgattagtcgaatgacggtcaatttggatgacagccccgacatt
gttttgccaatacatggtctgcgtattgtgaaagctatagagtataactataagacgaag
cagatttattgggttgatggtagaaccaaaactataaagagatcttatgataatgggtta
gagccagaaacatttctccccaatccaggtgatgagccaaagttccatcctcacgatttg
gctcttgatccttatagtggtttgatatactggacatgctctcagaccaacgtcattaac
gtcactcgtcttgatatgactgaagtcggagtcgttataagagatgataccgagaagcca
agagcaattgttctggatcctgagcggggatacatgtattggacaagtgttagtcaaaat
aaacctcgaattatgagagcggcgatggatggcgcagacaagaccgtaattattagctct
agcctatctgaacctgaagcactggcaattgacacagagagtaataaactgttttggtcg
gatgtcacattgcacagaatagaaagttctgacctgaatggtggaaatcgtaatgtcttg
gtcgactctcagttatcaacaccacatgctttaacgatatttggaacccatttatactgg
attgacaaggattcaatgttgattgagcgagttgataaaataaatggagatcaacgggag
aaaatccttggtcgtcttactcagctgagcgatatccacgctgttagaaacaactacccg
tcagctgattcccatccgtgtgccatcaacaacggtggttgttctcatatttgctttctc
gtcgatggtgtgaaaacttgtgcatgtccgattgacttagttttaagtgatagcagaaca
acatgtggagaaccgccgacctgttcacctgatcatttcacttgcaaatctggcaacatt
gaatgcatcccgcaggcctgggtctgtgataccattccagagtgcgcagatgaaagcgac
gaacagaactgccctacatgttccaaattgcaatttcattgtaagagcggtcagtgtatc
gataagaagttacgatgcaatggtgaacccgattgcaacgatgaatctgatgaaaaattt
tgtcaagctccctgctggaaggatcagtttgaatgttccaatggacaatgcgttgatagt
gaattggcagaatgcaatgacattattgaatgtgatgacgggagtgatgaagtaaactgt
gaccaccactcagtcgttgagccaaatacatcaccagttcgtagcgccgggagcatgcac
tccttgattggtgctgtggttggtttcattttcgtcatcatcgttattggtatcgccatg
tggtggtggaggagatataaactccagccagattcaatgtgtgataaccaatttgtcatg
ttgaacaatcaccaaaacaactatactgcaatggtcggagttggtccgcaacagacaacc
ccaccaagatcaatatcaggtatttcaaaatgccatacaaagtctataaatacatgcctg
tctgtaagtacggtacccgcaggaagcaatgtgcaacactacgacagaagccatgtgacg
ggagcatcatctagcggcagtagcatgggaagtcattatccaaaagaaactctgaatcca
ccgccgagccccgtaacagaacgatcacattatactgctgaattgtactacccatcgcac
agtccgcatgcatcacgctcatacagacattacaaatcacggaatattccaccaccgccc
acgccgtgtagtactgacgtatgtgaagatagtgaaccatattcacgtcccaacaagagg
aaatattactcgaatccgtatccgccgcccccgactccccaaagtgttctttcagataat
tacgagagctgtccgccatcaccatcaacggaacgaagtttctgtaatccatacccccct
ccgccttcaccagcaacagactctccgtaa
DBGET
integrated database retrieval system
