Saccoglossus kowalevskii (acorn worm): 100377152
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Entry
100377152 CDS
T04123
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100377152
Spliceosome [BR:
sko03041
]
Common components
Common spliceosomal components
General mRNP proteins
100377152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
Nup35_RRM_2
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
100377152
NCBI-ProteinID:
XP_002742404
UniProt:
A0ABM0N185
LinkDB
All DBs
Position
Un
AA seq
556 aa
AA seq
DB search
MKDKENMAEDFDVEAMLEAPYRKEDHDEKEVSESRNSKKSSRRRSRSRSRGRDHRYRRRS
RSNSRSKSRHRRSRSRSRHRRSRSRSRDRDRRYGGSYRDRYRRSPDRSPDRRKRKSYSPV
RGKYDRHDRQEKKKSKSKSPSPIKKKDLPDLPPEERDARTVFCWQLSQKIRPRDMEEFFS
SVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSVPLALGLSGQKLLSIPIMVQASQAEKNR
AAQNSQNLQKGNSGPMRLYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYG
FITFHDAEDAKKALEQLNGFELAGRPMKVGHVTERSDAATDASFLDSDDLERSGIDLGTT
GRLQLMAKLAEGTGFQVPAAAAAALNPLAGLPGIGLPVLPGTTPPQVMPPQPVNLQASLA
AAQQQAQQQAAALHQPPPTVSMPSIATPCFMLSNMFDPTNETSSGWDREIQDDVIEECNK
HGGCVHIYVDKTNPLGVVYVKCATVQIAQMAVNALHGRWFAGKMITAAYVPLANYHALFP
QAIAMTQPLIGSAQHP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaagaaaatatggctgaggactttgatgttgaagccatgttggaggcacca
tacagaaaggaggaccacgacgaaaaggaagtttcagaaagcaggaacagtaaaaaatcg
agccggcggaggagtcgcagtcgtagccgtggaagggatcacagatacaggcgaagaagt
agaagtaacagtcgcagcaaaagtcgtcatagacgtagccgcagcagaagtcgccacaga
cgaagtcgcagccgcagcagagatagggataggcgttatggtggtagttatagggatcgt
tatcgtagaagtcctgacagaagtccagacagaaggaaaaggaaaagttacagtcctgtt
cgtggaaaatatgacagacatgatagacaagagaagaaaaaaagcaagagcaagagtccc
agtcctataaaaaagaaagatttaccagacctaccaccagaggaaagagatgcgaggaca
gttttttgttggcagttgtctcaaaagattcgccccagggatatggaagaatttttttct
tcagttggaattgttcgagatgtaagacttatttctgataggaattcaaggcgatctaaa
ggaattgcatatgttgaatttcaagataaaaacagtgtcccattggcacttggtctaagt
ggtcaaaagttgttaagtattccaatcatggtacaggcttcacaggcagagaagaacagg
gctgcacaaaactctcaaaacttacaaaaaggcaattctggtcctatgaggctgtatgta
ggatcattacattttaatattactgaagaaatgctgcggggaatttttgagccatttgga
aagattgacaatattcaactgatgaaggacaatgaaacgggaagatcaaaaggttatgga
tttattacatttcacgatgcggaagatgcaaagaaagccttagaacagctgaatggattt
gaattagcaggacgtccaatgaaagttggccatgtcactgaaaggtctgatgcagctact
gatgcttcatttttggacagtgatgatttagaaagatctggtatagatcttgggacaaca
ggacgattacaacttatggccaaattagctgaaggcacaggttttcaagttccggctgcc
gcagctgcagcccttaatcctttagctggtttaccaggtattggactgccagtactgcca
gggacaacaccacctcaagttatgccaccacagcctgtcaatttacaagcgtcacttgca
gcagcacaacaacaagctcagcagcaggccgcagcattgcatcaaccacccccaactgtt
tcaatgccatcaatagcaacaccatgctttatgttatccaatatgtttgatcccacaaat
gagaccagctcaggttgggacagagaaatccaagatgatgtgatagaagaatgcaacaaa
catgggggctgtgttcatatatatgtagataaaaccaatcctttgggtgttgtatacgtt
aaatgtgccactgtacagatcgcacagatggcagttaatgccctacatggacgatggttt
gctggaaaaatgataactgctgcctatgttcctcttgccaactaccacgcactgtttcca
caggccatagcgatgacgcaaccacttattggctcggcacaacatccgtga
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