KEGG   Saccoglossus kowalevskii (acorn worm): 100377153
Entry
100377153         CDS       T04123                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100377153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sko03041]
    100377153
   03036 Chromosome and associated proteins [BR:sko03036]
    100377153
Spliceosome [BR:sko03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100377153
 Complex B
    100377153
 Complex C
   U2 SnRNP specific factors
    100377153
Chromosome and associated proteins [BR:sko03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    100377153
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Vac14_Fab1_bd
Other DBs
NCBI-GeneID: 100377153
NCBI-ProteinID: XP_006811167
LinkDB
Position
Un
AA seq 1315 aa
MAATTREELELQIREIQSRKANLQQRKSGKLDGISEIERVQLGAEGHFDQDIYGSSRNKY
EGYVTSIATNDADDDDDEEVPAGTLMGKRANYTAPASVLNDIQRSAVDYDPFAEHRIPKI
ADREDEYRARRRKMIISPERHDPFRDGGKTPDPKSRTYAEIMSDQALSKDQHDVRSRMHE
KAKAGDLHAVNGAEQPVSKPAKRRRWDQAGGGDETPGATPKKKASSWDQAEAGTPSHTRW
DETPGHQKGGETPGATPGASTRVWDATPGHASTPGHASTPGHATPGHATPGRGATPSARR
NRWDETPRTERETPGHGSGWAETPRTDRGDDGISETPTPGASSRRRSRWDETPANQMGGA
TPVLGQGITPTGQKAMAMATPTPGHLMQMTPEQMQAYRWEKEIDDRNRPWTDEELDSLFP
EGYKVLQPPAGYVPIRTPARKLTATPTPLGGMSGFHMQVEDRSTNHGLEQPPGNLPFLKP
DDAQYFDKLLVDVDESTLNPEELKERRIMKLLLKIKNGTPPMRKAALRQITDKAREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISTMRPDIDNLDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDEQQKVRTITALAL
AALAEAATPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFPSPDEEMKKIVLKVVKQCCATDGVESQYIKDEILPPFFKHFWQHRMALERRN
YRQLVDTTVELANKVGAAEITSRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDSRLE
EQLIDGILYAFQEQTTEDVVMLNGFGTVVNALGKRVKPYLPQICGTILWRLNNKAAKVRQ
QAADLISRIAVVMRTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKGIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGSEYVSAREWMRICFELLELLKAH
KKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTAC
AAIKHMALGVYGFGCEDALIHLLNHVWPNIFETSPHVIQAVMDAVEGLRVGLGAIKLLQY
SLQGLFHPARKVRDVYWKIYNTLYIGAQDALVAGYPRVSNEEKNFYIRNELDYFL
NT seq 3948 nt   +upstreamnt  +downstreamnt
atggccgctaccacaagagaagagttggaactgcaaatccgagagattcaatctcggaag
gccaatcttcaacaaagaaaatctggaaaacttgatggaattagtgagattgaaagggtg
caacttggtgcagaaggacactttgatcaagatatctatggttctagtagaaataaatat
gagggttacgtcacatctattgcaactaacgatgcagatgatgatgatgatgaggaagtt
cccgccggaacattgatgggcaaaagagcgaactacacagccccagcatcagttctcaac
gatatacaacgtagtgcagtggactatgacccttttgctgagcacagaattcctaaaatt
gcagacagggaagatgaataccgggcacgcagacgaaagatgatcatatcacctgagcga
catgatccatttagagacggtggcaagacccctgatccaaagtcacggacgtatgctgag
attatgtctgatcaagcactgtcaaaagatcagcatgatgtgagatctaggatgcatgag
aaggccaaggctggagatttacatgctgttaatggagctgaacagcctgtttctaaacct
gccaaaagacgacgttgggatcaagctggtggtggagatgaaacgccaggtgcgactcct
aaaaagaaggcatccagttgggatcaagcagaagctggaactccatcgcatactcgctgg
gatgaaactccaggtcatcaaaaaggaggtgaaacacctggtgcaactcccggtgccagt
acacgcgtatgggatgccactcctggacatgcaagcacgccaggacatgccagtacacct
ggtcatgccactcctggtcatgctacgcctggtcgtggtgctactcctagtgcaagaaga
aatcgttgggatgagacaccaaggactgagagagaaacgcctggccatggcagtggatgg
gctgaaacaccacgtaccgatagaggagatgatggaatatcagaaaccccaacaccaggt
gcatcaagtcgtcgaaggtcacgttgggatgagactccagcaaatcagatgggtggtgcc
acaccagtgttggggcaaggtataacacccactggacagaaggctatggcgatggcaact
ccaaccccaggccacttgatgcagatgacgccagaacagatgcaggcctatcgatgggag
aaagaaatagatgacagaaacaggccgtggacggatgaagaattagactcattatttcca
gaaggatacaaagtattacaaccaccagctggttatgttccaatccgtactccggcacgt
aaactaaccgcaactcccactccacttggaggaatgagtggatttcatatgcaagttgag
gataggtcaaccaatcatggtttggaacagccccctgggaatctaccgtttctaaaacca
gacgatgcccagtattttgacaaactactggttgatgttgatgaaagcactctcaatcca
gaagaacttaaagagcgccgcatcatgaaattgcttttgaagataaagaatggaactcca
ccaatgagaaaagctgccctgcgacaaattacagacaaagcccgtgaatttggggctggt
cctctattcaatcaaattttgcctcttctcatgtctcctacactggaagatcaggagcgt
cacttgttggtgaaagttattgacagaattctttataaattggatgatttggttaggcca
tatgtccacaagattcttgttgtcattgaacccctattgattgatgaagattactacgct
cgtgttgagggtcgtgaaattatctccaacttggccaaagctgctggtctggctactatg
atttcaaccatgcgacctgatattgacaacttggatgagtatgtacgtaacacaactgcc
cgtgccttcgctgtagtagcctctgccctgggtattccatctctgctgcctttcttgaaa
gctgtgtgtagaagtaaaaagtcgtggcaagccagacatactggtattaaaattgtacaa
cagattgctattctcatgggctgtgctatcctgccacatttgagaaacttggtggaaatc
attgaacacggtcttgttgatgaacagcagaaagtacgtacaatcacagctttggctttg
gcggctttggcagaagctgctacaccctatggtattgaatcctttgatagtgttctcaaa
ccattgtggaagggtattcgacaacacagaggaaaggtattggctgctttcttgaaagcc
attggttatctaatcccattgatggatgcagaatatgctaattattatacaagggaagtg
atgttgatcttgattcgtgagtttccatctcctgatgaagaaatgaagaaaattgtgttg
aaagtggtaaaacagtgttgtgccacagatggtgtggaatctcaatacatcaaagatgag
atcctgccaccattcttcaaacatttctggcaacatagaatggcattagagaggagaaac
tatagacagcttgttgatacaactgtagagttggcgaacaaagtaggagcagctgaaatc
actagtaggatagtggatgacttgaaagatgaagccgaacaatatcgtaaaatggtgatg
gaaacgattgaaaagattatgggtaatttaggcgctgctgacatagactccagactagaa
gagcagctcattgatggtattttatatgcattccaggaacaaaccactgaggatgtggtt
atgctgaatggttttggcacagttgtgaatgctctgggaaaacgagtcaagccgtatttg
ccacagatctgtggtactattctatggcgtctcaacaacaaagcagctaaagttaggcaa
caagcagcagatctcatatccaggattgctgtggttatgaggacatgtcaagaggaaaag
ttaatgggtcatttaggtgtggtgttgtacgagtacctaggagaagaatacccagaggtt
cttggtagtatactgggtgcactcaaaggtattgtcaatgttattggtatgcataaaatg
acgcctcctatcaaagatttactgccacgtctcacaccaattctaaaaaacaggcatgaa
aaagtacaagagaactgtatagacttggtcggcaggatagcagacagggggtcagagtat
gtatcagctcgtgagtggatgaggatatgttttgaactgctggaattattaaaagcccac
aaaaaagctatcaggcgtgcgactgtcaacacgtttggttacattgcaaaagcaatcggt
ccacatgatgtactggctactctgttaaacaacttgaaagtccaagaacgtcagaatcgt
gtgtgtacaactgtagctatagccatagtagctgagacctgttcaccgtttacagtactg
ccagctctcatgaatgaataccgtgtaccagagttaaatgtacagaatggtgtcctcaaa
tcattatcattcttatttgagtatattggtgaaatgggaaaagattacatctatgccgtg
tcgcctctcttggaagatgctcttatggacagagatctggttcatcggcaaacagcgtgt
gcagctataaaacacatggcattgggagtgtatggttttggctgtgaagatgcactcata
catttacttaaccatgtttggcccaatatatttgaaacatcaccacatgtgatacaggct
gtcatggatgctgtggaaggactaagggttgggcttggtgcaatcaaactcctacagtat
tcactacaagggttatttcatccagccaggaaagtacgagacgtctactggaagatttat
aatacactgtacattggggctcaagatgctttggttgctggttatccaagagtatcaaat
gaagagaaaaacttttacatcagaaacgagttggattacttcctgtag

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