Saccoglossus kowalevskii (acorn worm): 100377298
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Entry
100377298 CDS
T04123
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100377298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100377298
03036 Chromosome and associated proteins [BR:
sko03036
]
100377298
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100377298
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100377298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Dit_like
Motif
Other DBs
NCBI-GeneID:
100377298
NCBI-ProteinID:
XP_006825402
LinkDB
All DBs
Position
Un
AA seq
1714 aa
AA seq
DB search
MFGGQNKTPFGGASFGTQQAGFGAAATTPFGQSAGSGVGSLFGNKAATPVGFGTPNAFGA
QTPGSSLFGTSTAATSTVNTGGLFSNQGSAFGTKPTTSTSGGFNFGGQTQSTGLFGTAGT
SGTTGTTGLFATPSTSTAGGAGFGANFGGTAGSGGLFGQTAATAPFGQTGTTPTAGLFGA
GGFGANVPTGTTIKFNPPTGTDIMQKSGVSSNINTRHQCITAMKEYESKCLEELRLEDYG
ANRKGPGTGAGLLGAGGSISQPDASKVGGLFGATATGTTGGLFGQNKTFPAAGTTGYGQT
ASGSLFGQTAQPQQTSLFASKAGGFGASTGSSLFTGTTGFGQTQQKSLFGQPQASTGLFG
ATPTTSATGFGATATAPFGQTSAFAQQSQAGSLFKPGTGFPTAAPTSALSFGATAPGSGL
FGANKPASGLSLGATATSLAPGFGTTTPAGSLFGKPNTFGTATGLNTSGLMSTGLGAGFG
TGTTTSLFGNTPKPTTGLGTFGSTLGSGLGTGFGTGLGVGTTTTSLGTDPNVAVAQQAQL
QQQIAALTSSPFGDSPLFRNTLQDSSRKEEILKPTSSAAQKALTTPSHYKLSVRPTAKIK
AKPLYSIAGKQQLFDGLDDEDTALSSDIFIPRKNIKKLVIKNSLSPSMAVQRPSIAIEEE
LIAPQSEYPDETENERRDADVIDIRQTPNDFMKTPRSVNSPLISGENANLDCTISALNVK
NKTKSQQPPIQPTQTSDIESSLNETVESHASEDEDEDLDMAPHPAGIVLRRSGYYTIPGM
AELAELLNNGDCFVEDFAVGREGYGSVFFPGLTNVANLNLDEIVHIRRKEITLYPDENTK
PVTGHGLNKKAEVTLDCTWPNDKTTRKPIKSPNRLKTLSYAEKLEKATMKLGAKFIDYRP
ETGSWVFQVPHFSKYALEDSDEENDDLPGQDPKKLKTLQQQKLQKEQQQKLKEQEKVLSG
EDALQSEEPMKEDRDTDSDMAETTREPLPQLHLRDADDMEQEEPVAHSHRFATSLGMSSH
RMQVMKASFFGDEEQMEQVPASGFGSSAYPSTVRSSPAPLDDSRHDKGPEVDTIPFSLFP
TKPSYKFSLETTPFNVVIERIQIAPHIDGKNTKVQIQHENSLQVQLEHSMCSILDGCPVF
VPEPGVKALHEYCRVADDDIQDDSNGDDSETLQHTSLVFSLCKALWGRLPEDVMAEKGKY
TYQKARRDEFSKWLSMAARDRIQTEIQDAKAKDQHMDCIFSQLSGNQISEACEIAQKFKD
HRLSLLISQLEGCFDLKYDLQKQLSDWEENGAINFMDESRIRVNTLLAGCPVWISSRGNI
NTCEMLDWKRALAVHLWFICSKTASISDALKEYEKAFKGRSNFNKYAVSPLPPYLENNPD
NDEGEDEHHVIRDTCYHLLKLYSQHAHRMERILAPTTSTPYLLDYRLSWHLYQVLQAIDY
THISEQQSAMLQCNFASHLESIGMWHWAIFVLLHIQDNTRREHSVRNLLCQHCTLSNDEE
NERKEDLLVNKFRIPREWIHEAKGLRAKYEGCHNDQAVHLLKAGHWNDAHMIIIRHLSAD
AIINEDFEHLHELLSVLAPGDRSATIQDWNVGGKVFLDYIRISQKLESLKNEGIPNMYDV
ERLHPEIASLCGRVKHLECHTAKDRLCQSEMAKKTANLMKTVLILQQQSLNPELEPIIPS
RLLAPHIGNLPMPEDYALQELRQLTRSYMIEMTS
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaggacagaataagaccccatttggaggggcatcttttggtacacaacaagct
ggttttggcgcagcagcaacaacaccatttggacaatcagctggaagtggcgtaggcagt
ttatttggtaacaaggcagcaacaccagtaggctttggcacacccaatgcatttggagca
cagacccctggtagtagcttatttggaacatcaactgctgccacatcgactgtcaacaca
ggaggcctgtttagtaatcaaggtagtgcctttggaacaaaaccaacaactagcacaagc
ggtggtttcaactttggtggacagacccaatcaacaggtttgtttggaacagctggcact
tcaggcaccacgggtacaacaggtttgtttgccacgccctccacatctactgccggtggt
gcaggctttggtgctaattttggaggtacagcaggaagtggtggtctgtttggtcagacg
gctgccacagcaccatttggacaaactggaacaacacccactgctggactttttggtgct
ggtgggtttggtgccaatgttcccacaggtacaactataaaattcaatccgcctacgggt
acagatataatgcagaagagtggtgtttcctccaatatcaatacaagacatcagtgtatc
acagctatgaaagaatatgaaagtaaatgtttggaggaattaagacttgaggactacgga
gcaaaccgtaaaggtccaggtactggggctggattacttggagcaggtggctccatatca
cagccagatgccagtaaagtaggtggattgtttggagctaccgctactggcactactggt
ggcctgtttggtcaaaataaaacgtttcctgcagcaggcacaactggatatggacagact
gcctctggtagcttatttggacagactgcacagccacaacaaacaagtctatttgctagc
aaggctggtggctttggcgcaagtactggttcatcattgttcactggcacaacaggattt
ggacaaactcaacaaaagagtctatttggccagccacaggcgagtactggtttatttgga
gcaacgccgactacatctgccacgggatttggagcaactgctacagctccctttggacag
acatctgcattcgcacaacaaagccaggctggaagtttatttaaacctggtacaggattt
cctactgctgctcctacttctgctttgtcgtttggtgcaactgctcctggaagtggactg
tttggtgccaataaacctgcttctggtctgagtttaggagctacagcaacaagtcttgca
cctggctttggtacaaccacacctgcaggaagtctctttggtaaacccaacacatttggc
acagcaaccggtctgaataccagtggattgatgagtactggacttggtgccggatttggt
actggtaccacaacctctttgtttggaaacactcctaaaccaaccactgggcttggaaca
ttcggttctactttaggtagtgggcttggaactggttttggtactggtcttggggtggga
acgacaacaaccagccttggcactgatccaaatgtagctgtagctcagcaagctcaactc
caacaacagattgctgccttaaccagttctccttttggtgactcaccactcttcagaaac
actctacaggattccagtaggaaagaggagatactaaaaccaaccagttcagcagctcaa
aaagcgttgactactccatcacattacaaattatctgtgagacctactgctaaaataaaa
gccaagcctctctactcgatagctggaaagcaacagttatttgatggtctggatgatgaa
gacactgctctcagctcagatatatttatcccaagaaaaaacatcaaaaagttggttatt
aagaacagcctctctccaagcatggcagtacagaggccatccatagcaattgaagaagag
ttgattgcaccacaaagtgaatatccagatgaaacagaaaatgaaagaagagatgctgat
gttattgatattagacaaactcctaatgactttatgaaaacaccaaggagtgttaatagt
ccacttatctctggagagaatgccaacttggattgtactatctctgccttgaatgtgaaa
aacaaaaccaagtcgcaacaaccaccaatacaaccaacacagacgtcagatattgaatca
agtttgaacgaaactgttgaatcgcatgccagtgaagatgaggatgaagacttggatatg
gctccacatcctgcaggcatcgttcttcgtagatcaggatactataccatcccagggatg
gctgagttagcagagttgctaaataatggcgattgttttgtggaagactttgctgtcggc
agagaaggatatggcagtgttttctttcccggattgacgaacgtggcgaatcttaacctg
gatgagatagtgcatatacgtcgtaaagagattacactgtatccagatgagaataccaaa
ccagtgactggtcacggacttaataaaaaagctgaagtgacactggattgtacgtggccg
aatgataaaaccactcgtaaaccgataaagagtccaaatagattaaaaactctatcatac
gcagagaaattggaaaaagcgacaatgaagctaggtgccaagtttatagattatagacca
gagaccgggtcatgggtgtttcaggttcctcatttctcaaagtatgccttagaagacagt
gatgaagaaaacgatgacctgccgggtcaggatcccaaaaaattgaagactcttcaacaa
caaaaacttcaaaaggaacaacagcagaaactgaaagaacaggagaaggtactatctggg
gaggacgcattgcaatctgaagagcctatgaaagaggacagagacacagatagtgacatg
gctgaaaccacaagagaaccgttgccacagcttcatctcagagatgctgatgacatggag
caagaggaacctgtagcccattcacatcggtttgctacatctctcggtatgagctcacat
cgtatgcaagtcatgaaagcatcattctttggtgatgaagaacaaatggaacaagtccct
gcaagtggatttggtagttcagcttatccgagtacagtcagatcctcaccagctccacta
gatgacagcagacatgataaaggtccagaagttgacacaattccattttcgttgtttcca
acaaaaccaagctataaattctcgctggaaacgacaccattcaatgttgttatagaaaga
atccaaatagctccacacattgatggcaaaaacacaaaagtacagatacaacatgagaat
agtttacaagtgcaattagaacatagtatgtgttccatactggatggatgtccggtcttt
gtaccggaacctggtgtcaaggcactgcatgaatactgtagagttgctgacgatgacata
caagatgacagcaatggagacgatagtgagactctgcaacacaccagcttggtgttcagt
ctttgtaaagcattgtggggaaggctgccagaagatgtaatggctgagaaagggaaatac
acataccaaaaagcaagacgagatgaattctctaaatggttgtcaatggctgcaagggac
aggatacagacagagattcaagatgcaaaagctaaggaccaacacatggattgtatattc
agtcaactgagtgggaatcaaatcagcgaggcttgcgaaatagcacagaaatttaaagac
catcgactatcgttattaatatcacagttggaaggatgttttgatttgaaatatgaccta
cagaagcagctgagcgactgggaagagaacggggcaattaattttatggatgaatcccgt
attcgtgtaaatactttattggctggctgtccagtatggatatcgtcgcggggaaatatc
aatacttgcgaaatgctagattggaaaagagccctcgctgtccatttatggttcatctgt
agtaaaacagcatctatatctgatgcacttaaagaatatgaaaaagcatttaagggaaga
agtaattttaacaaatatgcggtatctccactgccaccataccttgaaaataaccctgat
aatgatgaaggagaagacgaacaccatgtcatcagagatacatgttatcatttattgaag
ctatatagtcagcatgcgcacagaatggaaaggatactagcacctaccacgtcaacaccg
tatctcttggattatagactaagttggcatttatatcaagtactacaagcaatagattat
actcatatatcagaacaacagtcagctatgttacagtgtaactttgcatcacatttagaa
tccataggcatgtggcattgggcaatatttgtattacttcacatacaagacaatacaagg
agagaacattcagtacgtaatttattatgccaacactgtacgctatcaaatgatgaagaa
aatgagagaaaagaagatcttctggtcaataaatttagaattccaagggaatggatacat
gaggctaagggattaagagctaagtatgaaggttgtcataacgatcaagcagtacatcta
ttaaaagccggacattggaatgacgcacacatgattattattagacatctttctgctgat
gctatcattaacgaagactttgagcacttgcatgaacttttgagtgttctagcccctggt
gatcgcagtgccaccatacaagactggaatgttggtggaaaggtgttcctggactacatt
cggatatcacagaaactagaaagcttaaagaatgaagggattccaaacatgtacgatgtg
gaaagattgcatcctgaaattgcgtctttgtgtggtagagtaaaacatctggagtgccat
acagcaaaggataggttatgtcagtctgagatggccaagaagactgctaacctgatgaaa
acagtacttatattgcagcaacagtctttaaatccagagttggagcctataataccatca
cgtttgttagctccacatatcggcaacttaccaatgccagaagactatgcattacaggaa
ctgagacagcttactaggagctatatgatagaaatgacatcgtag
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integrated database retrieval system
