Saccoglossus kowalevskii (acorn worm): 100377305
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Entry
100377305 CDS
T04123
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
sko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100377305
03015 mRNA surveillance pathway
100377305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100377305
03041 Spliceosome [BR:
sko03041
]
100377305
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100377305
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100377305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100377305
NCBI-ProteinID:
XP_006812133
LinkDB
All DBs
Position
Un
AA seq
834 aa
AA seq
DB search
MADAGFFRGTSAEQDNRFCNKQKKLLKQMRFAEVLEKKVSMSKVNLDTIKPWITQKITDI
LSFEDDVITEFIFNQLEVENPDAKTMQINLTGFLNGKNAREFMGQLWELLVSAQENIAGI
PAIFLEKKKEEIKQRQLEQERIKEGLKKLQDREDMEDSKSDKEVNGQEKSQSKSKSGSPN
RSSGSDSDSDSSAPKRVIKKGSESPPPVGVVKSEDKSMKAESNDKDKRRLSSNDKSRRRR
HSRSYSRSRSRDRDRERDRDKSRGHRKRRSRSRSYSPRRRRRSPSPRRRYRSRSRSLRRR
SPPPPPPPPRRRQRRSPSPRRRRKYSYSSSDSSRSRSRSPKRRAKSVSPRRKSSKGSGSP
EKKAKDVKAPSSSPPPAHYKQKLNDPKKKDGDGKDSSSSSSSDEDEKKQPHLVKSTKKSP
PKTSRYPQRHYRKHSETSSSGSDDETTKTKSRKRRDSSSDSRSPSPMPRKKRRSFTPERY
RPRRYSRSPSPRRRRYSSPRRYSPPPRPPPPRHYDSYYRYQPRRRFSPRSPSPDRRRRRS
PSPRRRSPVIDRRRGSPAGGRFRSRTPEKRQRSRSLDRFHNKKKPKTRTEKARSPSYSSS
SSESQSPSPVKKKVVKNEKDSRSPDRKKSHTEKNRNPPSPRRRSNSSPSPVKKHRSQSPR
RKHQSVSPDRKQRYSSSPSPEKNLPVSTSRKERPKSSPERQVRSVTPERKKHRAATPTPE
KIKKEVEDKEAHRSSKISRSRSSSESPPPVKVKKEKIRSKSASPECSEVENKKKDKKKHK
KHKKHKKHKKHKKKKEQDEEVIDSEDGDANLDELEKALREKALQSMNKAQSSTK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgctgggttcttccgtggcaccagtgcagaacaagataatcgtttttgtaat
aaacagaagaaactcttaaagcagatgagattcgccgaagtcctggaaaagaaggtttcc
atgagcaaagtgaacttggacaccatcaaaccatggataacccaaaaaatcacggacatt
ctcagctttgaggatgacgtcatcacagaatttatcttcaatcagctggaggttgagaac
cctgatgcaaagactatgcagatcaacctgactgggttcctgaatgggaaaaatgctcgt
gaatttatgggacagctctgggagcttttagttagtgcccaggagaatattgcaggtata
cctgcaatcttcctggagaaaaagaaggaagaaattaaacaaagacagctggaacaagaa
agaataaaggaagggttgaagaaattacaagacagggaagatatggaagattccaaatcg
gataaagaagtcaacggtcaagaaaagagtcagtcaaaatccaagtccggttctcccaac
aggtcatctggttcagattctgacagtgattccagtgcaccaaaacgtgtgatcaaaaaa
gggtctgaatcaccaccacctgttggtgtggttaaatcggaagataaatcaatgaaagct
gaatctaacgacaaggacaaaagacgactgtcttccaatgacaagtccagaaggcggcga
cattcaaggtcatattctcgaagcagatccagagacagggatagggaaagagatcgggat
aaatcaagaggacacaggaaaagaagatcaaggtcacgatcatattccccacgtagaaga
cggcggtcaccatctcccagaaggcgttataggagcaggtcacgctctctaaggagaaga
tcaccaccgccgccgccaccaccaccacgaagaagacaaagacgttcaccaagtccacgc
agaaggagaaaatactcgtactcatcttctgatagttcaagatcacgctcaaggtcaccg
aagaggagagccaaatcagtttcgccaaggcgaaaaagttctaaaggttcaggaagtccc
gaaaaaaaagctaaagatgtgaaagctccatcctcgtcacctccgcctgcacattataaa
caaaaattgaatgatcctaagaagaaagatggtgatggaaaggacagctcttcttcgtct
tcctcagatgaagatgaaaagaaacaacctcatttagtcaaaagtacgaagaagtctccc
ccgaaaacaagcaggtacccccaacgacattacaggaaacactcagagacatcaagttca
ggttcagatgatgaaaccacgaagactaaatcaagaaaacgacgagattcgtcatcagat
agcaggtctccgtcacccatgccgagaaagaaaagaagaagcttcactccagaaagatac
aggcctcgtagatactctcgttctccatccccaagacgaaggcgatactcatcaccaagg
cgatattctccacctccaagaccaccaccacctagacattatgattcgtattataggtat
caaccacggagacgcttttcacccagatccccatctccagacagaaggcggcgtagaagt
ccaagtccaaggaggcgtagccctgtgatagataggcgtagaggtagtccggcaggcggt
aggttccgaagccgtacaccagaaaagcgacaacgtagccgttctctggatagatttcac
aacaaaaagaaacctaaaactcgtactgaaaaagcccgtagcccttcttatagcagcagc
tcttcagaaagtcagagtccttcacctgtgaaaaagaaagttgtaaaaaatgaaaaggac
agtcgttctccagacaggaaaaaatctcacactgagaaaaatcgtaaccccccttctccc
aggcggagaagcaactctagtccctcgcctgttaaaaaacatagaagtcaaagtcctcgg
agaaaacatcagagtgtcagcccggatagaaagcaaagatacagctcatcaccgtcgcct
gagaaaaatctgcctgtttctacttcacgaaaagaacgtccaaaatcttcgccagagagg
caagttcggtcagtcacaccagagcgtaaaaagcacagagcagccacacccacaccggaa
aaaattaaaaaggaagtggaagacaaagaagcccacagaagtagtaaaatatcgaggtcc
aggtcaagttctgagagtcctccacctgtaaaagtgaaaaaagaaaaaattagatcgaag
agtgcatcccctgagtgctctgaagtggagaataagaaaaaggacaagaaaaagcataaa
aagcacaagaaacacaagaagcataagaaacacaagaagaagaaagaacaggatgaagag
gtaattgacagtgaagatggggatgctaacttggatgaactggagaaggctttaagagag
aaggcactgcaatcaatgaacaaagcgcagagttccaccaaatga
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