Saccoglossus kowalevskii (acorn worm): 100377649
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Entry
100377649 CDS
T04123
Name
(RefSeq) probable ribonuclease ZC3H12B-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100377649
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100377649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
PRORP
UBA_N4BP1_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100377649
NCBI-ProteinID:
XP_002740809
LinkDB
All DBs
Position
Un
AA seq
922 aa
AA seq
DB search
METKTEFVIPQSHQSVLEKAKDRVQTLFDVCVVLANLVADGGGKQWIQVTGQYEQTSKAK
EYILSLCDPQYKRTEKYPPELDAILRKRVDYIEHESRAAISFSGDFTATVRGTDINVMTA
CSLMEKEINDAQNGIENTELSNPRGEDYCDSSQSFSHTPYIIDVAQRLSSEDCRSPGSTS
KDSDYNTDPEDEPDGGFSDNSRLQKLPDGEAKIAVSRTCSDQTWYQFQLDANVTTDPDGS
PVSSLKKSDHYSANVDFATKLGYTEQQVLTVLDQLGPEADKNDLLGALVKMAKIDNDDKF
IPHGGSPTVGFETLDDAVIIDPQLDESSNLRAIVIDGSNVAMSHGNKEVFSCQGIAIVVD
WFLKRGHTCIKVFVPQWRKEASKPETPITGQEILTQLEKDHILVWTPSRRINGRRVVCYD
DRYVLKSAMELDAIIVSNDNFRDLQSENPEWKKMIEERLLMYTFVDDTFMPPDDPLGRHG
PSLDNFLRKTPTMPESLPAPCPYGRKCTYGNKCKYYHAERPHNQKSMSDRLQEQAKTRRE
LRARGTHESAGRILSAPGEQKKVVSPQNSNNIPEKKYAQMYKEINVPKRPVSGTVSNELR
PESEGYVRKPVEHYEPYSEFSRGVANYHQPQGGYIRGPMQYRQSQQPHTVPLVGYVRPQE
YHSQQLPHTVDLAQGYVREPHPHRYMDRQDEVLMNKFRQMKLRDHSDYMHNGNYGYGSRG
YSKEEYHQHAPLSRQQSYQHPDVYGQMHSQGQPPAEYMDHQGHANVTRMRSFPVEGAIPQ
IREPRPNMMRQNSTSDPQIYQDDERMLRTHRGYYPEMEPTHWSSADKLYSGPPTCNGGEQ
IPWPGPKTVRAPKEVISRSRKTESPKKDVLSSGPPFPPGDARLFVFYNLSSIFQEKDILQ
AMRRHPEERDPQKLCGFIINKN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagactaagactgaattcgtgattcctcaaagtcaccagagtgttctagagaaggct
aaagaccgggttcaaacgttattcgacgtttgtgtggtgcttgccaatcttgttgctgac
ggcggaggcaaacagtggatccaagtcactggtcaatatgaacaaacatcgaaagccaag
gaatatatcctgtcactgtgtgatccgcagtataagcggacggagaaatatcccccagaa
cttgacgctatattacgcaaacgggtagattacattgagcatgaatctcgcgctgccata
tcattttctggtgactttactgcgaccgtgagaggcactgatattaatgttatgaccgca
tgctctcttatggaaaaagaaataaacgatgcacaaaatggaattgaaaacactgaactc
tctaatccaaggggagaagattattgtgattcgtcacagtcgttcagtcatacaccttat
atcatagacgttgctcaaagactttcaagtgaggactgtagaagccctggcagtacatct
aaggactctgattacaatacagatcctgaggacgaaccagacggcggattttcagacaat
agcagacttcagaaattaccagacggggaagcaaaaatagcagtttctcggacttgctct
gatcagacttggtatcagtttcaattagacgcgaatgttaccaccgatcctgacggctct
cctgtaagtagtttgaagaaatcagatcattacagtgccaatgtggattttgctacaaag
ctaggatatactgagcaacaagtattgaccgtgcttgatcaactgggccccgaggctgat
aagaatgacctacttggtgcattggtcaaaatggccaaaatagataatgatgataaattt
atcccacatggtgggtctccgacggtcggctttgaaactcttgatgatgctgttattatt
gatccacagctggatgagagctccaatctcagagctattgttatagatggaagcaatgtg
gctatgagtcatggtaacaaagaagtattctcatgtcaaggaattgccattgttgtggac
tggtttttaaaacgaggacacacttgcatcaaagtatttgtcccgcagtggaggaaagaa
gcatccaaaccagagacaccaatcacaggacaggagatacttactcaacttgagaaggac
catatattagtttggaccccatcacggcggataaacggacgacgtgttgtatgctacgat
gatcgctatgtcttgaaatcagcaatggagttggatgcaatcattgtttccaacgataac
tttcgagatctacagagtgaaaaccctgagtggaaaaaaatgatcgaggagagattatta
atgtacacatttgtagatgatacgtttatgcccccagatgaccctctgggaagacatggt
ccaagtttggacaatttcctgcgaaaaactccaactatgccggagtcacttccagcccct
tgtccatatggaagaaaatgcacgtatgggaataaatgcaaatactaccatgcagagcgg
ccgcacaaccaaaaaagtatgagcgatcggctgcaggaacaagccaagaccaggagagaa
ctcagagcgagaggtacccatgaatcagcgggaagaattttgtctgcaccgggagagcag
aaaaaagttgtcagccctcagaactcaaataatataccagagaagaaatatgcacaaatg
tataaagaaataaacgtaccaaagcggcctgtgagcggcactgtctcaaatgagctgaga
ccagaatctgaaggctatgtgcgaaagcctgttgaacactatgaaccgtactctgaattc
agtcggggagttgctaactatcaccaaccgcaaggtggttatatacgaggacccatgcag
tatcgtcagtcgcagcagccgcacacagttcccttagtaggctatgttagaccgcaagag
tatcattcacagcaactgccacatacagttgatttagcacaaggatatgtcagagagcca
catcctcatcgatatatggacagacaagatgaagttcttatgaataaattcaggcaaatg
aaacttcgcgatcacagtgattacatgcataatggtaactatggttatggtagtcgtggt
tactctaaagaagagtatcaccaacatgctccgttatcgcggcaacaaagttatcagcat
cctgatgtatatgggcagatgcatagccaagggcaacctccagcagaatatatggaccac
cagggacatgctaatgttacaaggatgcgaagctttcccgttgagggcgccatccctcag
atacgtgaacctcgtccgaatatgatgcgtcaaaacagcacatctgatccccagatatac
caagatgatgaacgtatgctgcgtacacacagaggctattatcccgagatggaaccgact
cactggtcatccgcggataaactttatagcggacccccaacgtgtaatggtggtgaacaa
attccctggcctgggccaaaaactgttagagcacccaaggaggtgatttccagatcaagg
aaaacagagtctcctaaaaaagatgttctttcttcaggaccgcctttcccacccggtgat
gccagacttttcgtgttctacaatctgtcgtcaatattccaagaaaaagacattctacag
gctatgcggagacatcctgaggaaagagacccacaaaaactgtgcggttttataataaat
aaaaactaa
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