Saccoglossus kowalevskii (acorn worm): 100377740
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Entry
100377740 CDS
T04123
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03030
DNA replication
sko03410
Base excision repair
sko03420
Nucleotide excision repair
sko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100377740
03410 Base excision repair
100377740
03420 Nucleotide excision repair
100377740
03430 Mismatch repair
100377740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sko03032
]
100377740
03036 Chromosome and associated proteins [BR:
sko03036
]
100377740
03400 DNA repair and recombination proteins [BR:
sko03400
]
100377740
DNA replication proteins [BR:
sko03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100377740
DNA Replication Termination Factors
ELG1-RFC complex
100377740
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100377740
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100377740
Check point factors
HRAD17(Rad24)-RFC complex
100377740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
nSTAND_NTPase5
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
RuvB_N
nSTAND3
Viral_helicase1
Mg_chelatase
AAA_19
AAA_assoc_2
AAA_24
AAA_11
Rad17
AAA_25
ABC_tran
NTPase_1
AAA_18
MipZ
MeaB
AAA_28
AAA_23
DNAX_ATPase_lid
AAA_5
bpMoxR
AAA_3
6PGD
Motif
Other DBs
NCBI-GeneID:
100377740
NCBI-ProteinID:
XP_006821095
UniProt:
A0ABM0MM54
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MYRVEKYRPQVLSEVVGNEDTVSRLAVFAKEGNVPNIIIAGPPGIGKTTSILCLARCLLG
TAFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALR
RTMEIYSKTTRFALACNTSDKIIEPIQSRCAVLRYSKLSDAQVLKRLLEISERENVTYND
SGLEAIIFTSQGDMRQALNNLQSTWQGFGDVTGENVFKVCDEPHPLVIKNMLEYCVDSNI
DEAYRLMRHLWMMGYSAEDIINNMFRVCKTAQIQEYLKLEYIKEIGYTHLRIAEGVQTLL
QMAGLLARLCQKSLPS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtacagggttgaaaaatacagaccacaggtgctatcagaagttgttggaaatgaagac
actgttagtaggctagctgtctttgctaaggaaggaaatgtacctaatatcatcattgct
ggtccaccaggaattggcaaaactaccagtattctatgtttggctagatgtttacttgga
actgctttcaaagatgccgtgttggaactaaatgcatccaatgacagaggcattgatgtt
gtaagaaataaaatcaagatgtttgcccaacagaaagtaacactacccaaaggaagacac
aaaattatcatccttgatgaggcagatagtatgacagatggtgcacagcaagctttgagg
cgaactatggaaatttattcaaaaacaactaggtttgccttggcttgcaacacttcagat
aaaattatagaacctatccaatctcggtgtgctgtgttacggtattccaaattaagtgat
gcccaagtattgaaaagattgctggaaatatctgagagagaaaatgtgacttataacgat
agcggactagaagcaattatattcacttcgcaaggcgacatgcgacaggctctcaacaat
ttacaatcaacgtggcaaggttttggtgatgtcactggtgaaaatgtattcaaggtttgt
gatgaaccacacccactggtgatcaagaacatgctggagtactgtgttgactctaacata
gatgaagcttatcgattaatgaggcatctatggatgatgggatactcggctgaagatatc
attaacaacatgtttagagtctgtaagacggcacagatacaagaatatctcaagttagaa
tatattaaggagatcggttacactcatcttcgaatagcagagggtgtacagacgctgttg
caaatggctggactgttagcaagattgtgtcagaaatctcttccttcgtaa
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integrated database retrieval system
