Saccoglossus kowalevskii (acorn worm): 100377837
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Entry
100377837 CDS
T04123
Name
(RefSeq) RRP12-like protein-like
KO
K14794
ribosomal RNA-processing protein 12
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100377837
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
Other 90S particles
100377837
Pre-60S particles
Other pre-60S particles
100377837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
V-ATPase_H_N
FemAB
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
100377837
NCBI-ProteinID:
XP_006820689
UniProt:
A0ABM0MKZ8
LinkDB
All DBs
Position
Un
AA seq
1248 aa
AA seq
DB search
MVRGPGRVKGGKGKRWKKGQSSSTNPVTRSHRQVARSGFFHQRTGESGLTERALQHHNQS
LLDSDGDAIIQDGDHETVSVGSYRSFMSGLSDCTNPTFDKVKQLWDNNSASHKEICAVLA
AVTEVIRSQGGQETETEYFAALVSSRTSTLSCLANLLRVQEPVIWAEPSTLHSYHAILSF
TIHPKPKVRKAAQHAVCAVLKGSAFMTHGAAPPYHPAASSTAKFCIQQIEETGGAGEPRA
TLHVLGLLKDILGVFPQTSLRATCETLLRVMTLSNVLITSCAMQALHGMFMSKPKSSSLP
ADLNAQLINALYDYQPNENDVQPILAWLAVMQTALCNLQRLDERLCVSHLPRLFTSAMKC
LASEKIEITKAASHTLKELLNECVKPAAGRLEAEVKSSPPGSPTAAYKMFKSVENGLGYK
YHASWGLVLQTLGVFFQVFGRHCPPMLKKCLQSMADLRSTHHFLYIYDLDKAVGMAIRSM
GPKEVLNAIPLQITGDEDNYSFPRSWLLPVLRDNIRETELQFFIQFFLPLAAKLKKKSLE
HEQSGRMIESKTYNILQSQIWSLLPGFCNSPTDLCQSFKNIARIMGTVLNERPDLRSDVC
AALRLLVNKNINNDKNKNEMKKYSKNFLPILFNIYTTVDATKLDTTRFTVLETIKVYLII
SDTKLVNGFLDKTCDKLINDEVTSLVKHAVMDLCIGMVPYIDIEKLNKVYKTIVPLLTSK
DKTLQKKSYRILEEICVSSSEASQKFVEENLCDLQKTLLSSLSSSASSSKAPRLRCLIYI
VKRLPDENSQFVDDIVSEVILCTKEIGIKARQAAFSLLVEMGNAIIRINQDKKSKAECVG
VYIEMIAIGLVGSTTMTSATVLALTRLLYEYKDLIPSGILAELIENVCILLKSRNREVVK
SALGFVKVLIIVMSDVALAQHLEKLINSMVTWSSDSKHHFRFKVKNLFGKLMKKFGAGIV
FKMVPESYHKMLRNTQKIREREKKRRSIHEAVNAPDDDRPTSETPHAKIESIEDLLRDTD
SEDEEPEKEKPQSKKKKQAMKKQQNAAWLQEDAEQEPLDFLDPGVSKKVLATKPVAQVVD
EKSTGVKHDFKTSSDGRLIITLDEEEGDEGKQTKRKRKPKDEVDELDELMDETSQSKPSR
KRKLEDNSDDELPVKYKAGGGGIHRPMKSAKRRGDLTSGVDFKAKKAGGDMKKKGKPDPY
AYIPLDFKQLNRRKKAKSAGQWKSIVHAAKRGANKGMKIKGQKRKGKK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtggcccaggccgggtaaagggcggtaaaggtaaacgatggaagaaaggacag
agcagtagcaccaatccggtgacgaggagtcacagacaagtagcaagaagtggtttcttt
caccagagaacaggtgagagtggtttgacagagagggcgctacagcaccataatcagagt
ctcttagacagtgatggagatgcaatcatccaagatggcgaccacgagacggtcagcgtg
ggaagttatcgaagcttcatgagtggattaagtgactgcacgaacccaacatttgacaaa
gttaaacaattgtgggataacaattccgcaagtcataaagagatatgtgctgtgttagct
gctgttacagaggtcatcagatcacaaggtggacaagaaacagaaacagaatattttgca
gctctcgtaagttcaagaacatctacgctatcatgtctggcaaacctcttgcgtgtacaa
gaaccagtcatctgggctgaaccatctactttgcactcttatcatgccattcttagtttc
actattcatccgaaaccaaaggttaggaaagcagcgcaacatgctgtgtgtgctgtactg
aaaggaagtgctttcatgacacatggtgctgctccaccgtatcacccggccgcttcctct
acagccaaattctgcatacaacagattgaagaaactggaggggcaggtgaaccaagagct
actctccatgtacttggattattgaaggacatcttgggtgtattcccacaaactagttta
agagcgacgtgcgagaccctccttcgtgttatgacacttagtaacgtgttaataacatca
tgtgcgatgcaggctcttcacggtatgtttatgtcaaaaccaaaatcaagtagtctacca
gctgacttgaatgcgcagttaataaacgcactgtacgactaccagcccaacgagaacgac
gtccaacctatcttggcatggttagctgttatgcagacagcactctgtaatttgcagaga
ctggacgagagactgtgcgttagtcacttacctcgattgttcacttcagccatgaagtgt
ttggcatctgagaaaatagaaataactaaagccgcatcacatactttgaaggagttgttg
aacgagtgtgtcaaacccgccgctgggcgactggaagctgaagtcaagagttccccgcct
ggttcaccgactgctgcatataaaatgttcaaatctgtagagaatggactgggttacaag
taccatgcatcgtggggtttagtgctgcagacactcggagtattctttcaggtttttggc
agacactgtccaccgatgttgaagaaatgtctgcagtcaatggctgatttacgaagtacg
catcattttctgtatatctatgatttagataaagctgtgggaatggccattagatccatg
ggacccaaggaagtactgaatgctatacccctacagattactggagatgaagacaattac
agttttccaaggagttggctcctgccagtacttagagacaatataagagagacagaatta
caattctttatccagtttttcctaccacttgctgcaaaactcaagaaaaaatctttggaa
catgaacaaagtggtcgtatgattgagagcaaaacatacaatattctacaatcacagata
tggtcactgttacccggtttttgtaatagtccaactgatctctgtcagtcatttaaaaac
atcgctcgtatcatggggactgtgttgaatgaaagacctgatctcagatcggatgtctgt
gcagccctcagactgctggtcaataaaaatatcaacaatgataaaaacaaaaatgagatg
aagaagtattcaaagaattttttgccaattttattcaacatttacaccacagttgacgcc
acaaagctggacacaacaagatttacagtattagaaaccattaaagtttacctcataata
tccgacactaagttggttaatggttttctggataaaacgtgtgataagctaatcaatgat
gaggtgacgtcattggtaaaacatgctgtaatggatctgtgcattggtatggtgccatat
atagacattgagaagcttaacaaagtctataaaaccatagttccactactcacaagcaaa
gacaaaactttacagaaaaaatcatatcgtattttggaggaaatatgcgtgagctcgtca
gaagcaagtcagaagtttgttgaagagaatttatgcgacttacagaagacattactaagt
tctctatccagttcagcatcatcatccaaggcacccagactacgatgcttgatttacatt
gtaaagcggttaccagacgagaattcacagtttgttgacgatattgtgagtgaagtcata
ctgtgtacaaaagagatcggtatcaaagccagacaagctgcatttagtttattagttgaa
atgggtaacgcaattattagaataaatcaagacaagaagagcaaagcagaatgtgttggt
gtttatatagaaatgattgctattggtttagttggctctaccacaatgacgagtgcgact
gtactggcgctaacacgactgctctatgaatacaaagatcttattcctagtggcatattg
gctgagctgattgagaatgtgtgcatactattgaaatctcgtaatagggaagtcgtcaag
tctgcgcttggatttgtgaaagttctcattatagttatgagtgatgttgctcttgctcag
catctagaaaaactgataaatagtatggtgacgtggagcagtgacagcaaacatcatttt
cggttcaaggtcaaaaatctttttggaaaattgatgaaaaaatttggagctggaatcgtc
tttaaaatggttccagagagttatcacaaaatgttgagaaacacgcaaaagatacgtgaa
agagagaagaaaagacgatccattcatgaagctgtgaatgctcctgatgatgacaggccc
acatcagaaactccccatgctaaaatagaaagtattgaagacttactgagagatacagac
tctgaggatgaggaaccagagaaagaaaagccgcaatcaaaaaagaaaaaacaagctatg
aagaaacaacagaatgctgcatggttacaagaagatgctgaacaggagccgctagatttc
ctggaccccggagtatcaaagaaagttctagcaacaaaacctgtcgcacaagttgttgat
gaaaaatcgactggggtgaaacatgatttcaagacatcatctgacggtagattgattatc
accctggatgaggaggaaggggatgaaggaaaacaaacaaagagaaagaggaaaccaaaa
gatgaagtagatgaactagacgaactgatggatgaaacaagtcaaagcaagccaagtcgt
aaacgtaaactagaggataactctgatgatgagctcccagtgaaatataaagctggtggt
ggtggtattcatcgaccaatgaagtccgctaaaaggcgaggagatttgaccagtggtgta
gacttcaaggcaaagaaagcaggcggtgacatgaagaaaaaaggcaaaccagatccatat
gcatatataccattggatttcaaacagttaaacagaaggaaaaaggccaagtcagcgggt
cagtggaaatctatagtccatgctgctaaacggggtgctaataaaggaatgaaaataaaa
ggacagaaacgaaaaggaaaaaaatga
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integrated database retrieval system