Saccoglossus kowalevskii (acorn worm): 100378026
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Entry
100378026 CDS
T04123
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1-like
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sko03036
]
100378026
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100378026
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100378026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_C
ResIII
Helicase_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100378026
NCBI-ProteinID:
XP_006818661
LinkDB
All DBs
Position
Un
AA seq
1268 aa
AA seq
DB search
MDDDIFFDLYEEEQQTPIFEFSSKRTDLMGPPPCVDDLILPSQRSITSTQVDKLFSSDSI
FSNSQDFYSVKSNSQRPSTPTLFDDEPDDSILSPSTDSLRKQLFPDTPKTVHHETLNSSA
GFRKRSLFKPPLRPNNIPQYSGSSQGSLSTQPTNNSSNRKDAIHAGSDHSVKKPDFSWSR
HQHSSTLGISDSPHPLTIPGFVTPGGSKGEVTKLRPVTEIPEKYRSVFSEYPYFNIVQSK
VMDDVLYSDKPLVVCAPTGSGKTVIFELAIIRLMIQMGSYAANDEKWDSMTRKWRDNKSL
VQMVRLFLIDEVHTLNDEARGATMEAVISRMKTIQTALKENQSLAKHSKLRFLAISATIT
NICDIGEWLGEVSEPAVMHKMDDTHRPVRLRKVVLGFPCHENQSEFKFDLSLNYKLSGVI
QTYSDQKPTLVFCATRKGVQQAASTLVKDARFIMNSQHRQRLQKYSNMLKDSKLRDLVVC
GVGYHHAGLDISDRKTIESMFTKGDLPVLLATSTLAMGVNLPAHLVVVKSTQHYVTGMYC
EYSETQVLQMIGRAGRPQFDTTATAVIMTRFNTKKKYEALLNGTQNIESSLHLHIMEHLN
AEIVLNTITDMNIALEWLKSTFLYIRVVKNPTYYGIPPGLSKEALENKLKDMCSKYINSL
KEIDLVTMEDDNLVLTSTELGKLMARYCIAYDTMKLFTKISGPTSLSELVNNVSNCKEFR
DIQLRVSEKRALNALNSSKNKATIRFPMVGKIKTAAMKVNCLIQAAFGCLPVQDFALAQD
TNKIFRAGQRVTRCLTEYFMQKSDFHAAVNSVLLSKCFKAKLWENSGYIARQLEKVGPTL
TQAMVNAGLTTFKSIEETNPREIELIVNRHPPFGNLIHEAVKTLPKYDAVITQGDTILCK
NGTWSKRIEVQRAKKGEEIFVHLISQDLVGLDVQKTFKPVYLGQYMKGVDCKQEKLLKKD
ISSATRPKSQDEQTGRIPCSHRCINKDVCGHECCKYGVKSNRINRSLKPMVAVEPCKGSH
VQGHISQLHSKVQQIPNAPPLKRLKLEKVSPDKPEQDSYLSNSYYNNKEYLQYLGCNDSD
WEDNDDIEILKNTLLDEVPICDEYTVDDVDYDQIEDDLDNIVNHPKDFSTASQYFSAQNN
SNQYTSYSNIPTKSSLLYKLTPTSRCQQQSYTPGISKPSTAVINKGHRNFQFSPSKPLPP
YELKNQKQPPKYTIYTQPDRILNQSNEEMIEYGSKADQNTITTNLRNKFSFKKVKNVSFN
PANYSEHK
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacatattttttgatctgtatgaggaagagcaacaaacacctatctttgag
ttttcaagcaagagaacagatttaatgggaccaccaccatgtgttgatgatctaatcttg
ccatcacagagaagcatcacttcgacccaagtggataaactgttttcatcagactctatt
ttctccaactcacaagatttttattcagtcaaaagtaattcccaaagaccaagcacacca
acactgtttgatgatgaacctgatgatagtattctttcaccaagtactgattccctgaga
aaacagctatttcctgatactcctaaaactgtacatcatgaaactctaaatagttcagca
ggatttaggaaaagatcattattcaaaccaccattaagacctaataacattccacaatat
tcaggcagtagtcaaggttcattgagtactcagcctaccaacaacagcagcaatagaaaa
gatgccattcatgctggaagtgaccactctgtcaaaaagcctgacttctcatggagtaga
catcaacattccagtacacttggcatatcagatagtccccatcctctaaccattccaggt
tttgtaactccaggtggcagtaaaggagaagtcactaaactacgacctgtgacagaaatt
cctgaaaaatatcgctctgtgttcagtgaatatccatatttcaatattgtgcaatccaaa
gtaatggatgatgttttgtacagtgataaacctctagtcgtctgtgctcctactggatct
ggtaaaactgttatctttgaattagctattattaggttgatgattcaaatgggttcatat
gctgctaatgatgaaaaatgggacagcatgacaagaaagtggagggataacaaatcattg
gtacaaatggttcgactgtttctcattgatgaggtacatactttaaatgatgaagcacgt
ggtgctactatggaagcagtgataagtcgaatgaaaacaatccaaacagcactaaaagag
aaccagtcattggcaaaacacagtaaacttagattcctggctatatcagcaactataaca
aacatttgtgatataggagagtggttaggagaagttagtgagccagctgttatgcacaaa
atggatgatacacacagacctgtcagactgagaaaagttgttctaggatttccatgtcat
gagaaccagtcagaatttaagtttgatttgtctctcaattataaacttagtggagtcatt
cagacatactcagatcagaaaccaactcttgtgttctgtgcaacaagaaaaggtgttcaa
caagctgccagtaccttggtgaaagatgctagatttatcatgaactctcaacacagacag
cgccttcaaaagtattccaatatgctgaaagattcaaaacttagagatttggttgtatgt
ggggttgggtaccatcatgcaggactggatatatctgatagaaaaactatagagagtatg
tttaccaagggagatttacctgtattgttggctacaagtactcttgccatgggagtgaat
cttcccgctcacctagttgttgtgaaatccacccaacattacgtaacaggaatgtactgt
gaatacagtgaaactcaggtacttcaaatgattggtagagctggaagaccccaatttgat
acaacagctacagcagtcataatgacaagatttaatacgaagaaaaaatatgaagctttg
ttgaatggaacacaaaatatagaaagcagtctccatctgcacataatggaacacttaaat
gctgaaatagtactcaatactatcactgatatgaacattgcgttggaatggttgaaatct
actttcctctacatcagagtagtcaaaaatccaacctattatggaattcctcctggatta
agtaaagaagccctggagaataagctgaaagatatgtgcagtaagtacataaactccctg
aaggaaattgaccttgtaacaatggaagatgataatttagttctaacatcaacagaactt
gggaaattgatggcacgatactgcatagcatatgacaccatgaagctgttcacaaaaatc
agtggtcctacatcgcttagtgagctggttaacaatgtgtccaattgtaaggagttcaga
gatattcagttgagagtaagtgagaaaagagctttgaatgctttgaattcatctaagaat
aaagcaaccataaggttccctatggttggaaaaatcaaaactgctgcaatgaaagttaac
tgccttattcaagcagcgtttggatgtctaccagtccaagattttgctttggcacaggac
accaacaaaatcttcagagctggacagagagttactaggtgtttgaccgagtacttcatg
cagaagagtgatttccatgcagctgtaaattctgttctacttagcaaatgctttaaagca
aagctatgggaaaattctggatatattgcaagacaattggaaaaagtaggaccaacatta
actcaagcaatggtaaatgctggactcactacattcaaaagtattgaagaaactaaccca
agagaaattgaattgattgtaaatcgtcatccaccttttggaaatctgatccatgaagca
gtcaagactttacctaaatatgatgcagttattactcagggggataccattctgtgcaaa
aatggtacatggtctaagagaattgaagttcaaagagcaaagaagggggaagaaatattt
gtccatctcataagccaagatttagttggtcttgatgtccagaaaacatttaaacctgtg
tatcttggccagtatatgaaaggtgttgattgtaaacaagagaaactcctgaagaaagac
atatcttctgccactagaccaaaaagtcaagacgaacagacaggaagaataccctgcagc
catcgctgcattaataaagatgtttgtggacatgaatgttgtaaatatggcgtgaagtca
aatagaataaatagaagcctaaagccaatggttgcagttgaaccatgcaaaggctctcat
gtacagggtcatattagtcagttacattctaaagtacagcaaataccaaatgctcctcct
ttaaagagacttaagttagagaaggtaagcccagacaagcctgagcaggattcctacttg
tccaacagctattataataacaaagaatacttgcagtatttaggatgcaatgacagtgat
tgggaagataatgatgacatagagatcctgaaaaacactctccttgatgaagtaccaata
tgtgatgaatatacagtagatgacgtcgactatgaccagatagaagatgacttggacaac
atagttaaccatccaaaggatttctctactgctagtcagtacttctctgctcaaaataat
agtaatcaatatacatcatacagcaatatacccactaaaagtagtcttctttataagttg
actcctaccagtagatgtcaacaacagtcatatacgccaggaatcagtaagccgtctaca
gcggtcatcaataaagggcacagaaactttcagttttcaccaagtaagccgcttccacct
tatgagctaaagaaccagaaacaaccaccaaaatatactatttacacgcagcctgataga
atattaaaccagtcaaatgaagaaatgattgaatatggaagtaaagctgaccagaacacc
attaccactaatctcagaaacaaattttcattcaaaaaagtgaagaatgtttcttttaat
ccggcaaattatagtgaacacaagtaa
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