Saccoglossus kowalevskii (acorn worm): 100378031
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Entry
100378031 CDS
T04123
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100378031
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100378031
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
Pre-60S particles
Helicases
100378031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DUF4217
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100378031
NCBI-ProteinID:
XP_006819939
LinkDB
All DBs
Position
Un
AA seq
513 aa
AA seq
DB search
MAASSEKTWTELPVKLSAHVTDTLTDLKFKYMTPVQAACIPAFMGNKDVAVEAVTGSGKT
LAFLIPVLELLLKRTERLKKREIGAIIITPTRELALQIDEVLSEFVKRIPKLKTLLLIGG
TNPIIDVNKFLDIGGNIITATPGRLVDLFHRKQDGIDLASYVRTLEVLVLDEADKLLDLG
FENSINEILSYMPKQRRTGLFSATQTDEVEKLIRAGLRNPVRITVKEKQTKSQVMQFFES
ITFSPNFRVTQRTPFLLKNYYWSGVMVCTDVMARGIDILDVEWVIQYDPPTSATAFVHRC
GRTARIGKAGNALVLLTPNEDTYIEFIAINQRVPLQKCDALEDLEVVDVLEILKKMSMKD
RAVFEKGTRAFVSFVQFYSKHECKLIFRVKDLDFGRLARGFALLKLPKMPELKGKNVSGF
QSVDMDYNLLKYQFNGKNKECQVQEQSVPWSKQKEKKKKKQERKLKKERKRKHQFDDEDL
NDLSKDIRLMKKLKSGKISKEQFDEQFEETNKE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccagtgaaaaaacatggaccgagcttccagtaaaacttagtgctcatgtg
actgatacgctgacagatctgaaattcaaatatatgacgcctgttcaggctgcttgtata
ccagcttttatgggaaacaaggatgtagccgttgaagcagtaacaggaagtggtaaaacc
ttggcatttctcatacctgtattggagttgttactaaaaagaacagaaaggcttaaaaaa
agagagatcggtgctataatcatcacacctacaagggagctagctctacaaatagatgaa
gtattatcagaatttgttaaacggattcccaaattgaagacattgttgttgataggagga
acaaatccaataatagatgtcaataaattcttagatataggtggtaatataataaccgca
actcccggtcggttggtagatttattccatcgaaagcaggatggtatagatttggcatct
tatgtacgaactttggaagtattggtgttggatgaagcagacaaactactagacttagga
tttgaaaacagtattaatgaaatattaagttatatgccaaaacaaagacggactggttta
ttttcggcaacacagactgacgaagttgagaaactgatccgtgctgggctgagaaaccca
gttagaatcactgtaaaagagaaacaaacaaaatcacaggtaatgcaattctttgagtct
atcacattttccccaaattttagggttacacaaagaacaccatttttattaaaaaattac
tactggagtggtgtcatggtgtgtacagatgtcatggccaggggtattgatatattggat
gttgaatgggtgatacagtatgacccgccgacgtcagccactgcatttgtgcatcgctgt
ggcaggactgctagaattggtaaagctggcaatgctttggtgttattgactcccaatgaa
gacacgtacatagaatttattgctattaaccagcgggttcctcttcagaaatgcgatgcc
ttggaagatttagaagttgttgatgttttagaaatattaaaaaaaatgtcaatgaaagat
agggcagtttttgagaaaggcacgcgagcgtttgtgtcttttgtacagttctactcaaaa
catgaatgcaaacttatattcagggtcaaagaccttgattttggtaggctagctaggggg
tttgctcttctaaagctccccaaaatgcctgagttaaagggtaagaatgtgagtggattt
cagtcggtcgatatggattacaatttacttaaataccaattcaatggtaaaaataaggag
tgccaagttcaagaacaatctgtaccatggtcaaaacagaaagagaaaaaaaagaagaaa
caagaacgaaaattaaaaaaagaaagaaaaagaaaacatcagtttgatgacgaagacttg
aatgatctctcaaaagatataagattaatgaagaaactaaaatctggcaagatttccaaa
gagcagtttgatgaacagtttgaagaaacgaacaaagaataa
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