Saccoglossus kowalevskii (acorn worm): 100378126
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Entry
100378126 CDS
T04123
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100378126
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100378126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TAF6_C
RapZ-like_N
Motif
Other DBs
NCBI-GeneID:
100378126
NCBI-ProteinID:
XP_006819783
LinkDB
All DBs
Position
Un
AA seq
2337 aa
AA seq
DB search
MMKRTSKSAHHQNENRYTFQTFSERLSQINIDVIRKGKRQIGGTEDCDSHFVDGFLQWRE
LNCTVHFANFSKEIARDVTTYAQVVHHKEKIINALKTHLQIPNSLAYKPLLDLVVQLSKD
LQIDFYPYFQSFFDIIVELLNNHPQDTELLEDAFQCLGYLFKFLWRYLLKDIQDVFLFYS
PLLGSSKKDYVRRFAAESFAFLLRKLKDFDKMMYYILHHMEEKTELCEGVGKLFFEMMKG
VKTQFHSSAEKYFSVLLCSLGSADCREDLNFQLVYDCLFHTVTCMAKHSKRQSTSFVAVL
LTKRATHLKNLTLENSEVFPELQSVLKLLQVWIKQKGTSMDTICILPELLDCGNLSSDVI
DDILALVSAHIEDDSVSFKDKKELLTSVYGNQLCTFHQINMFTHRLLTLNNFDELALPCL
MEYFNKDENPTNEKKTELLFLLTKVITNKRTLPQSKEELTAFQQYQLNLNRLENITSIVE
QLLILSETMTDVLLSTQDKGVTDLMTVVLCQLFCTDDGIFKVCLDAETEPITLQSYRERL
RHLQQLMFIPRHRYARVPLLYLLGSLYINLSLIWNPVLGFIKTLAYEMERDEFFHVYTEH
LKSTTDKLEDIQSEDSVPALNTSEECNTVSDLLVQLSETCFKQDDKPDHYNHRHLLLKAM
ATFADKAEGKSRILTPVFLHFIQKEYEPTDHIVAPTEDLRAQSTVNKRIVTKKERKLAIK
SLIDYMSVFSKFKDPKSLYQESTLRELYLKLLCHPDTIVQQLSLNCLLSYKYKYLVPYQE
NLQRLLVEKSFRAELVAFSLDEDNAIVQNDHREQLFPLLMRVLYGRMLNKSGGKSKKSHI
LRFIAGCQSSELSHFIQLILEPIDEWVKEKNINLDFSEESFKLQSFVPLKKLQSVIEVCG
LLLSNLYHVLEPYLSLVLHSVLQITSRVSLVLEQRDLVHIKYVKPLRKLRQLGVDVINQF
FQQCELYEYSDIELQGLYGGIVWPVIQRLTQECLYSPTAVLKLAFTWTQHQRLHPLLVYY
PDDKLSLQVLGQIMELLSNKQIDQSVTTMIIDMIDNLLPIQDDDDDITDTIYNFPPKYIK
TDAFCSECVLRPYILTVLQYLRQVVQEKTNRKKNQKCAIPMKELHILSKLSTFVSDGQES
YQLIDILLPILRQIPQEKADLLLEILGIVKKLIIHCKNPQNFLRPLSKLLSWLSTTPSRS
LCCDIITLIGAADEKVAELCQLIVQLNKVDRRRLEEPDYTVRISAYTKISSTVTEMDYVD
LNYIIPIMHNCFYFISKVDDMSLRDNSSNILQIIIERISKEPSDKLQSLFELCVNQMIIP
AIKEGLGNKMENVRHEYILLLTKLVKYFPNKFQDLQVLHDKDIEKDFFKNITHIQQHRQM
RALRLVAQKCETKELGTYVLQTFLLPLATSVIFDANLSKNHQLVLDATLTIGAITKCLPW
QPYIKVLKYYLGLLMTDTLPQKMTVRLLANILDSFHFDLTNYKPAMKTNPKDVDEGCTGN
NDETVTEQAADESKYNTIINKILPKLEKCLTQKVDSDDEHRSVRSHVATDTEIVRIPLAI
AIIRLLLALPVQVRYQHIQRVVLKLCHSLKSRSSDIRESSRTTLIKVMSYLGTEYIKNVI
GELQHTLTRGYQKHVLTFTINAVLQGISDGLKPGDLDTCVDMLIQICNDELFGQIAEEKE
AAAITRNLMEARSSKSYDIYHILSKYISATHLTKLISAIKTVLDNTHSHKTVKKVEDVLR
KFTLGLLENKSLDAKDILLFIHGIVTQTLPFMIKDTQEDKKSTKSKHQQHSVLLLPQTPQ
RKPKATVHRKTNLHVLVEFGLQVIIGSVQSLSRLIQYSLPQLNDQAGKLAGLLFQLLKTY
GRSGTPKGDNLHLVQWCFKTMTMFLKNMQRYKLTEDQLQVLLSFVEEDIYDTTRQSTAFP
LLKAMLSRKLQCKEIETVMEKVAELSIISEANNIQVQCRQLMSQFLLDYPLGKKIRKYLE
FYVSQLTYEYEGGRKSTLEMLAAMFSIFPQNLLDENSGLFFVPMASSLANDNSVECRKLI
ALAIKTLLSKEEVEDKEGDHLLFNLLTCFGKILQNCAFIMKAKTHETVVKKMWVHIHSHI
LHNHSWVRLAVSQLYGQMFTIMTIDDVFHYCGSDLISQLVQDFCKQLHSKITNATLVDQD
VKNLVFLGKLIDQHHDSDDETNLAWLMSRLTLIQRYERANTTLGKERRTGILKWIAGMSV
YFTTDQIIEHLPVLLEIVHKELQNPSRKDVDLRTLAQEVVDILRSKVDVTVFTAVYTKVK
ISLEGIKIKRHQQEALEAVADPERAAKKKMRKNIAKKESKKRKIFERKPYKNKKFKK
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagaacttctaagtcagcacatcaccaaaatgaaaatcgctatacgttccag
acattttctgaacgtctatcccagataaacatagatgttattcgtaaaggaaaacggcaa
attggaggtactgaggactgcgactcccattttgttgatggattccttcagtggcgtgaa
ctgaattgcacggttcattttgcaaactttagcaaagaaatagctagagatgtaacgacg
tatgcgcaagttgttcaccacaaggagaagataattaacgctttgaagacacatctgcag
attccaaatagtttagcgtataagcccctcttagaccttgtggtacaattatctaaagat
ttacagattgatttctatccatattttcaatcattttttgatatcattgtcgaactcctc
aacaaccacccacaggatactgagttacttgaagatgccttccagtgccttggttacctc
ttcaagtttctatggcgatatctgctgaaagacatccaggatgtttttcttttctattca
ccattacttgggagtagcaagaaagattatgtcagacgatttgctgctgaaagttttgcc
tttcttcttcgtaaattaaaagactttgataaaatgatgtactatatcttacatcacatg
gaagaaaagactgagttatgtgaaggagtcggtaaactattctttgaaatgatgaaaggt
gtaaagacacagtttcactcgtctgctgaaaagtacttttcagttttgctgtgcagtttg
ggatcggctgattgccgagaagatttgaactttcagttagtttacgattgtctatttcac
acggttacatgtatggcaaaacacagtaaaagacagtcaacatcgtttgtggctgtcttg
ttgactaaaagagcaactcatcttaagaatctaacgttggagaacagtgaagtatttcca
gagttgcaaagtgttttgaaactattacaagtttggataaagcagaaaggcacatctatg
gacacaatctgtatattaccagagttgctagattgtgggaatctttcctctgatgttatc
gatgatatcttggcattagtatcagcacacatagaagatgattctgtcagtttcaaagac
aaaaaagaacttcttacatcggtttatggtaatcagctgtgtacatttcatcaaataaac
atgtttactcatcggttactaaccttaaataattttgatgagttggcattaccttgtcta
atggagtactttaacaaagatgaaaaccctacaaacgaaaagaaaacagaactattattc
ttattaacaaaagttataactaataaaagaacattgccacagagtaaggaagaattgact
gcattccagcagtaccagctgaatctaaataggttggaaaacattacctcaatagttgaa
cagttattgatattgagtgaaactatgactgatgtcttactaagtacacaggacaaaggt
gttactgatttgatgacagtggtgctttgccagttattttgtacagatgatggtatattc
aaagtttgtttggatgctgagacagaaccaattacacttcaatcgtacagggaaagactt
cggcatttgcaacaattgatgtttataccaagacatcgttatgctagggttcccttattg
tacctgttaggttcgttatatattaatttgagtttaatctggaatcctgtgctcggtttt
atcaagactcttgcttatgagatggaacgtgatgaattcttccatgtctatactgaacat
ctgaaatccaccacagacaaacttgaagacatccaatcagaggatagcgtccctgcacta
aacacttcagaagaatgtaatactgtctctgatttattggtacagttatcagagacatgc
ttcaaacaagatgataaacctgatcattataatcatcgtcatctgttattaaaagccatg
gcaacctttgctgataaggctgaagggaaatctcgcatattaacgccagttttcttgcat
ttcatacaaaaagagtacgagccaactgatcatattgttgcacccactgaggatttaaga
gcacagtccactgtaaataagagaattgtaactaagaaagaaagaaagctggcgatcaaa
tctttgattgattacatgtcagttttttcaaaatttaaagatccaaagtcgttatatcaa
gaatcaacactcagggaattgtatctaaagctcctctgccatccagacacaatagtccaa
caactctccttaaactgcctactgtcctataaatacaaataccttgtgccttaccaagaa
aacttgcaaaggttattggtggagaagagtttccgagcagaacttgttgcatttagtttg
gatgaggataacgctattgtacagaatgatcaccgagaacaactgttcccattactcatg
agggttttatatggtagaatgttgaataaatctggagggaaatccaagaaatcccacata
ttaagatttattgctgggtgtcagtcttcagaattatctcactttatacagcttatactg
gagcctatcgatgaatgggtcaaagagaaaaatattaacctggatttttcagaagaaagt
ttcaaattgcagtcgtttgtaccattgaaaaaactacagagtgttatagaggtgtgtggt
ctgttattgagtaacttgtatcatgtgttggaaccatatctatcgcttgtgttacactca
gtactgcaaattacatctagagtttcgcttgtcttagagcagagagatttggtacatatc
aagtacgtgaaacctctgcgtaaattacgacagcttggtgtagacgtaatcaatcaattc
ttccaacaatgtgaattgtacgaatacagcgatatcgaactacaaggcctgtatggtggg
attgtgtggccggttatacaaagattgacacaggagtgtctgtacagtcctacggctgtt
ttgaaattagcattcacatggactcagcatcagagattgcatccattattggtttactat
ccggacgacaagctgtccctgcaagtattgggtcaaattatggaattattgtccaataaa
caaattgaccaatcggtgaccactatgataattgatatgattgataatttgttacctata
caagatgatgatgatgacatcacagatactatttataatttcccacccaagtatatcaaa
acagatgctttctgctctgaatgcgtcctaagaccgtacatactgactgtacttcagtat
ctcagacaagttgtgcaggaaaagaccaacaggaaaaagaatcaaaagtgtgcaatacca
atgaaggaactgcatatcttatcaaaactgagtacgtttgtgagtgatggacaggaatct
tatcaattgattgatatattattaccaattctacgacaaattccacaagaaaaagcagat
ttattattggaaatactgggaattgttaagaagttaattattcattgtaaaaatccacaa
aactttctcagaccactgagcaaactgttgtcatggttatcaacaactccatcaagatct
ctttgctgcgatataattacattgataggtgctgctgatgagaaggttgctgaactttgt
cagttaattgtacagttgaataaggtggatagacgccggttagaagagcctgattacact
gtcagaatatcggcatatactaagatatcttcaacagtcacagaaatggattacgtagat
ttgaactatatcatacccattatgcacaattgcttctattttatatctaaagttgatgat
atgtcacttcgtgataattcttcaaatattctacaaataataatagagagaatatccaag
gagccaagtgacaagttacagtccttgtttgagttatgtgtgaatcagatgataatacca
gcaataaaggagggactcggcaacaagatggagaacgtacgacatgaatacatactactg
ttgaccaaactggtgaaatacttcccaaataagtttcaagatttacaagttcttcatgat
aaagatattgagaaggatttctttaaaaacattactcatatacagcaacatcgtcaaatg
agagcccttcgtctggtcgctcaaaaatgtgagaccaaggaactagggacgtacgtcctg
cagacgtttttgttgccattagcaaccagtgtgatatttgatgccaacctcagtaaaaat
catcagcttgtcttggatgccactctgaccattggtgctattaccaagtgtttaccatgg
caaccgtacatcaaagtgttgaaatattaccttggattgttgatgactgacacattgcct
cagaagatgacagtcagattattagcaaatattttggacagtttccattttgacttgacc
aattataagccagcaatgaaaacaaaccctaaagatgttgatgagggctgtactggaaac
aatgatgaaacagttactgagcaagctgcagatgaatccaagtataataccataataaac
aagatattaccaaaacttgagaaatgtctaacccagaaggtcgatagcgatgatgaacat
cgttcagttcgtagccatgttgccacggatactgagattgtacgtatacctttagcgatc
gcaataataagattgttattagcgttaccagtgcaagtcagatatcaacatatacaaaga
gttgttttgaagctgtgtcattctttaaaaagtcggtccagtgatatacgcgaatctagt
agaacaacattgatcaaggtcatgtcttatttaggaacggaatatattaaaaatgttatt
ggtgaattacaacataccttgactagaggctatcagaaacatgtactgacatttactatc
aacgcagtgttacaagggataagtgatggactcaaacctggtgatctggatacatgtgtt
gatatgcttatacagatttgtaatgatgagttgttcggacaaattgccgaagaaaaagaa
gcagcagctattacgaggaatctcatggaagctagaagttcaaaaagttacgatatatac
catatattatccaagtatatatccgcaactcatctgacaaagttaatttctgcaatcaaa
acagttttagataacacacacagtcataagactgtgaagaaagtagaagacgttctgaga
aaatttactcttggtttgctggagaataaaagtctagatgcgaaggatatattattattc
atacatggtattgttacgcagacgttaccgttcatgattaaagacactcaagaagataaa
aaatctaccaagtctaaacaccaacaacacagtgtattactattgccgcagacaccacag
aggaaacctaaggcaactgtacataggaaaaccaatctacatgttttggtagaatttgga
ttacaggtgataataggatctgtacagtcgttaagtcgtctcatacagtactcgttgcca
cagttgaatgatcaagccggtaaacttgctggcttgttatttcaactattgaagacttat
ggaagaagtggaacaccaaagggtgacaacttgcacctagtacagtggtgctttaagacg
atgacaatgtttctgaagaatatgcaacgatataaattgactgaagatcaactgcaagta
ttactaagttttgtggaggaggatatctatgacaccaccaggcagtcaacagcgtttcca
ttacttaaagcaatgttgtcacggaaactacaatgtaaagagatagagactgtaatggag
aaagtggcagagttgtcaatcatatcagaagccaataatatacaagtgcaatgcagacag
ttaatgtcacagtttttactggactatcctctcggaaagaagatacgaaagtatctagaa
ttttatgtttctcagttaacatacgaatacgagggaggaaggaaatcaactctcgaaatg
ctagctgcaatgttcagtatattccctcagaacttattggatgagaattcaggactattt
tttgttcctatggcgtcatctcttgctaatgataattcagttgaatgccgaaaattgata
gcattggccatcaaaacactcctatcaaaggaggaagtggaagataaagaaggagaccat
ctcttgtttaatttattgacttgttttggtaaaatattacaaaactgtgctttcatcatg
aaagctaaaacccatgaaactgttgtaaagaaaatgtgggttcacatacatagccatata
ttacataaccatagctgggtcagactggctgttagtcagttatatggtcagatgtttacc
ataatgacaatagatgacgtttttcattactgcggtagtgacttaatatcgcaactggtg
caggatttctgtaaacaattacattccaagattacaaatgcaacgctcgtggatcaggat
gtgaaaaaccttgtttttcttggtaaactaatagatcaacatcatgatagtgatgacgag
accaatctcgcatggttgatgtcaagactaactctgatacaaagatatgagagagctaat
accacattgggtaaagaaagaagaaccggtattttgaaatggattgctggaatgtctgtt
tattttaccactgatcaaattattgaacacttacctgtattgttggagattgtgcataaa
gaattacaaaacccatcgcggaaagatgttgatctcaggacattagcacaagaggtagtt
gatatattgagaagtaaagtggatgttactgtgtttacggcagtctatacaaaggttaaa
atttcactggaaggaatcaaaataaaaagacaccaacaggaggcactggaggctgtagct
gatccagagagggctgctaagaagaaaatgagaaaaaatattgctaagaaagaatcaaag
aaaagaaaaatatttgaaaggaaaccatacaaaaataaaaaattcaaaaagtag
DBGET
integrated database retrieval system
