Saccoglossus kowalevskii (acorn worm): 100378152
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Entry
100378152 CDS
T04123
Symbol
PRPF3
Name
(RefSeq) PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae)
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100378152 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100378152 (PRPF3)
Spliceosome [BR:
sko03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100378152 (PRPF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Sec8_N
Motif
Other DBs
NCBI-GeneID:
100378152
NCBI-ProteinID:
XP_002731125
LinkDB
All DBs
Position
Un
AA seq
651 aa
AA seq
DB search
MSLSRRDVEQLKPWLDKTVKKVLGFSEPTVVTAALNCVSKGMDEQKTVDNLKPFLDESAP
KFVKQLYNAVGEIKASNRQRKRAVKAQQDDGDEVRVKKAKLPMNIEEEPNIPVLNSQPSP
GQLTEQGIKEMMANARRAIEARKEQLTGLAPGSMSVQSMMPQAQSQALMNEALEKARKAA
EIQARIQATLNRQPGLLPGNIPGIRMIPGQPSKPTPLILDDQGRTVDATGKAIQLTQRMP
TLKANIRAKKRQEFKLVQEKAVDVFNESSQFYDPRVFAAPSGRAKRQFKFHDQGKFEQIA
QRVRAKSQLERLQQEIAQAAKKTGISCATKLALIVPKKQVAEEEIPEVEWWDAFILPSDS
YKDVHSKTDSDGKKNEKYTGITSLIEHPAQMRPPDEPMKPVEQPIFLTKKERKKLRRQGR
REGQRETTEKIRLGLEPPPEPKVRLANLMRVLGNEAVQDPTKVEAHVRAQMAKRQKAHEE
ANQARKLTAEQKSAKKLKKITEDTSCGVHTSVYRIRDLQNPSRKFKIEANCNQLHMTGFV
VLYRDVNVVVVEGGPKQQRKFKRLMLQRIKWNDDKRSKDDDDDDDSDDEREKKGNKCCLV
WEGMNKNRAFGDIKFKACPTERIAKEQFRNHGVEHYWDLANSEAIIEASED
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtcgagacgtgacgtagaacagttgaagccatggctggacaagacagtgaaa
aaagtattggggttctccgaaccgacagttgtaaccgccgcgttgaattgtgtatcaaaa
ggaatggacgaacagaagacagttgataatttaaagccttttttagatgaatccgcaccc
aaatttgtgaaacaattatataatgctgtcggagaaataaaagcaagcaacaggcaaaga
aaaagagcagtaaaggcacagcaggatgatggggatgaggtacgagtgaagaaagctaaa
ttaccaatgaatattgaggaagaacccaatataccagtattgaattcacaacctagtccg
ggtcagttaacagaacaaggaatcaaagaaatgatggccaatgcaaggagagctatagaa
gctaggaaagaacagctgacaggtttggccccagggtccatgtcagtacagtccatgatg
cctcaggctcagtcacaagccttgatgaatgaagctttagaaaaagccaggaaagctgct
gaaatccaggcaagaattcaggctactcttaacaggcaacctggtttgttaccggggaat
ataccaggaattagaatgataccaggtcagccttcaaaaccaacaccattgattttagat
gaccaaggaaggactgttgatgctactggtaaagcaattcaactgacacaaaggatgcca
acattgaaggccaatatcagagccaaaaaacgacaggaattcaaactggtgcaagaaaaa
gctgtggatgtcttcaatgaatctagtcaattctatgatccaagagtctttgcagcgccc
tcaggtagagccaagaggcaattcaagtttcatgaccagggtaaatttgaacagattgct
caaagagttcgagccaagtctcagttagaacgtcttcaacaggaaattgcacaagcagcc
aagaagactggtatttcatgtgccactaagctagctttgattgtgccaaaaaaacaagtg
gctgaggaagagatccctgaagtggaatggtgggatgcttttatattgccttctgacagt
tataaagatgttcacagtaaaacagattcagatggaaaaaaaaatgaaaaatataccgga
ataaccagtttaatagagcatccagcacagatgaggccgccagatgaaccaatgaagccg
gttgaacaacccatattcctcactaaaaaagagagaaagaaattaagaagacaaggtaga
agggaaggacagagggaaacaaccgagaaaataaggcttggtttggaaccaccacctgaa
cccaaagtaagactggctaatttgatgagagtacttggaaatgaagccgtacaagatcct
actaaagtagaagcacatgtcagagcacagatggcaaaaagacaaaaagctcacgaagaa
gctaaccaagcaagaaaactcacagctgaacagaaaagtgccaagaagcttaagaagatt
actgaggacacatcctgtggggttcatacatcagtttacagaatacgagatttacagaat
ccttctagaaaatttaaaatcgaagccaactgtaatcagctgcatatgactggttttgta
gtgttatatcgagatgttaatgtggtggttgttgaaggaggtccaaagcaacagagaaag
tttaaaaggctaatgttacagcgaataaaatggaatgatgataagagaagcaaagatgac
gatgacgatgacgattctgatgacgaaagggaaaagaaaggaaataaatgctgcttagtg
tgggaaggaatgaataaaaacagagcatttggcgatattaaattcaaagcttgccctaca
gagagaattgcaaaagaacagttccgtaatcacggtgttgaacattattgggatttagca
aacagtgaggccattattgaagcttcggaagattag
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