Saccoglossus kowalevskii (acorn worm): 100378311
Help
Entry
100378311 CDS
T04123
Name
(RefSeq) transient-receptor-potential-like protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sko04040
]
100378311
Ion channels [BR:
sko04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100378311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100378311
NCBI-ProteinID:
XP_002733765
LinkDB
All DBs
Position
Un
AA seq
953 aa
AA seq
DB search
MMELSSSTLELVTPPTRGDSPMMFPRNANYQNRGVASGLLNAAFTQRRSASVISGVSSIP
LQLFSEGNRLTAKERMFMEAAEKGDNATIQKCLKHPDPVNVNVTNILGRSALQISVDNEN
IEIVELLLAQPNVKIGDALLYAIREGVYKMVEMMVNHPSISREMLGGEWSKMTKDPQEES
SDYSPDISPVILAAHCNQFEILQLLLTRGATISTPHNVTCGCEHCTEKQHEDSLRHSLHR
INTYKALASPAWISLTSSDPILTAFKLSWELEHLAMRENEFKDVYQQLSHQSKTYAVDLL
EQCRSSEEVIAVLNRDNDSEDGFAEEDVMGGKITLIRLKLALKFEQKRFVAHAHTQQLLT
SIWYEGLPGWRKHNAFVKLLICLAVILLLPLMALCYLLFPHTKIGQLLRTPFMKFMNHSI
SFGFFLLLLVLASTVRFEGTRPASPSDTWVDSPRGREPNFIEVLIALWVFGFIWGECKQL
WEEGLKAYIRQWWNWLDFIMLSLYLCTISLRFTAWWLKKSGTYPSFTDGEVQRATWPGDD
PTLISEGVFAVANVFSFFRIIYLFQANPYLGPLQISLGCMLIDIAKFLFIFFLVLLSFAC
GLNQLYWYYGSSSPVHSQDADCPSNSNPDAFLSLDRSMQTLFWALFGLVGTDVIKLPTQG
HNYTEFVGEILFACYHVVAIIVLLNMLIAMMSKSYQEIEDHADREWKFARTKLWMSYFDE
GSTLPPPFNLIISPKSMVCFFKAIQRIMCGSCEKTKSRPQRQSLEGTIKKTHLNSDGVIG
PPLQENIKYQDVMKRLVSRYIHQQKAEQKQDGVNEDDLNEIKQDISSLRYELRADRKKEQ
MRGTSQIENVKHEIIGELRGISGAPENESTTIVGAPRRSLSTVNPPSFISQSFDKSELES
LKDDLIHTIRSEIKEELQESLRRALNSAAQESSVNGLLPTSSDLYHTHLYTQL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctatcttcgtcgaccttagagctggtgacgccaccaacgagaggagacagt
ccgatgatgtttcctcgtaatgccaattatcaaaaccgcggtgttgcctccggtcttctc
aatgcggcgttcacacagagacggtcggcgtccgttatttcaggcgtcagcagtattccc
ttgcagctttttagtgaagggaataggttgaccgcgaaagagaggatgtttatggaagct
gcagagaaaggagacaacgctacgatacagaaatgcctgaaacacccagacccggtgaat
gtaaacgtcacaaatatattgggacgaagcgctttacagatttcggttgacaatgaaaat
attgaaattgtcgagttattattggctcaaccgaacgtcaaaatcggcgacgcacttctg
tacgctatcagggaaggggtctataagatggtggagatgatggtgaaccaccccagtata
agcagagagatgcttggaggagagtggagtaaaatgaccaaagatcctcaagaagaaagc
agcgattattctccggatatttccccggttatattagctgcacattgtaaccaatttgag
attttacaattgcttttaacgcgaggtgctacgatttcaacaccgcataacgtgacgtgt
ggctgcgaacactgcaccgagaagcagcatgaagacagtttacgccattcattacatcga
atcaacacctacaaggcgttggccagcccagcatggatatccctcaccagtagtgatccc
atattgacagcttttaaattgagctgggagttggaacatttggctatgagggaaaacgag
tttaaagacgtgtaccaacaactgagtcatcagtctaaaacctatgccgtggatttactt
gaacagtgtcgcagctcggaggaggttatcgccgttttaaacagagacaacgactccgaa
gatgggtttgcggaagaggatgtcatgggtggaaaaatcacgttaataagactaaaacta
gcattgaagtttgaacaaaaacggtttgttgctcatgcgcacacccagcaattactaacc
tcgatatggtacgaaggtttacctggttggcggaaacacaatgcctttgtcaagctattg
atttgtttagcagtcatactattactgccgttgatggcgctatgctatctccttttccct
cataccaaaatcggacagcttctccggacgccatttatgaaattcatgaaccatagcatt
tctttcgggttcttcttgctattgttggttctcgcgtcgactgtgaggtttgaaggcaca
cgaccagcgtccccgtccgacacttgggttgacagtccgcgtggtagagagccgaatttt
atagaagtattaattgccttatgggtatttggttttatatggggagaatgtaaacaatta
tgggaagagggattaaaagcctacatcagacaatggtggaattggttggatttcataatg
ctctcgctttatctatgcacaatatctttacgctttacggcttggtggctgaaaaaatcc
ggcacctaccctagttttaccgatggagaggttcagcgagctacctggcctggcgatgac
ccgactctcatatcagaaggagtgttcgctgtcgccaatgtatttagcttctttcgaatt
atttacttgtttcaagccaacccgtatttaggacctctgcagatatcactcggatgtatg
cttattgacattgccaagttcttgtttatatttttcttggttttattatcgttcgcatgt
ggcttgaatcaactatattggtactacggcagttcttcacccgtgcattctcaagacgcc
gattgtccgtccaattccaatccggatgcatttctaagtctagacagatccatgcagact
ttgttctgggccctgtttggcttagtcggaacagacgtaattaaattgccgacacaaggc
cataactacacagaatttgtcggcgagattctgttcgcctgctatcacgtagtggcaatt
attgtgctcttgaatatgttaattgctatgatgagcaagtcgtatcaagaaatcgaggac
catgcagatagggagtggaaattcgcgcgtacaaaactctggatgagttattttgacgag
gggtcaacactgccgccgccattcaatttaatcataagcccaaaatcgatggtatgcttt
ttcaaagcaatacagagaatcatgtgcgggagttgtgaaaagacaaaatctagaccacag
aggcagtcattggaagggacgataaagaaaacgcatttaaacagtgacggtgttattggg
cctccgctacaagaaaatatcaaataccaggatgtaatgaaaagattggtcagtcgatat
atacaccaacaaaaagcagagcaaaaacaggatggcgtcaacgaggatgacttgaatgaa
atcaaacaggatatatcgagtctaagatacgagttgagagcagaccggaagaaggaacaa
atgcgtggtacgtcacagatagagaatgtgaagcacgagatcatcggcgagttacgggga
atctcgggtgctcccgaaaacgagtcgacgactatagtgggtgccccgcgacgcagtttg
tcaacagtgaaccctccatcgttcatctcccagtcatttgataaatctgaactcgagtcg
ctgaaagacgacctaatccatacgattcgcagtgaaatcaaagaagaattgcaagagtcg
ttacgacgtgcgttgaacagtgcagcccaagagagcagtgtcaatggcctcttgccgacg
agctctgacttgtatcacacacatttatatactcagttgtaa
DBGET
integrated database retrieval system
