Saccoglossus kowalevskii (acorn worm): 100378415
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Entry
100378415 CDS
T04123
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100378415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100378415
Spliceosome [BR:
sko03041
]
Complex A
U1 snRNP components
U1 related factors
100378415
Complex B
100378415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WW
FF
WW_TCERG1
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
100378415
NCBI-ProteinID:
XP_006814215
LinkDB
All DBs
Position
Un
AA seq
438 aa
AA seq
DB search
MQQQSSNAPSSTGSGGQSVGAFPGPPIPPMMMPPPFPGMQPPPGLPPGFMMGQAPPNLPP
PNLSQPPPGMPIPPPGMPLPPPNFSQPPPGMPLPPGLPPPMIPPTGIVPSGVTETAATPS
EKKKLSPQQGVIPQSQITPPVAPTTTTTANKSKVPGFVAASEQSMQVTLPSPQVATVKQS
ATTAGSSDTSPGTPTQSKPAEKKKPTWTEHKSPDGRIYWYNNGTKQSTWEKPDELKTHAE
LLLSQCPWKEYKSDNGKVYFHNVQTKESKWTIPKDLEDLKAKIEAEGLDKKMPPEPEEPE
PEPEPEPEPVPVAVAAAPQIPVRVLLEKEMEGQSTPVAASFTGSDVGTAENTPTVADQDP
DSAEEQVPEKKEYVYKTKEEAKKAFKDLLHEKEVPSNATWEQAMKMIVMDPRYTALTKLN
EKKQLFNNYKTQKAKEEK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaatcatcaaatgctcccagtagtactgggagtggtggccagtctgtgggg
gctttcccaggaccacctatcccaccaatgatgatgcctccaccatttccaggaatgcaa
ccaccacctgggcttcctccaggatttatgatgggtcaagctcccccaaatttgccacct
ccaaacttatcacagcctcctccaggaatgccaatccctccacctggaatgccattacct
ccaccgaacttcagccaacctcccccaggaatgccactaccgcccggtcttccacctccc
atgatcccacccacaggcattgtgccatcaggtgtaaccgagactgccgctacacctagt
gagaaaaagaaactgtcaccacagcaaggagtaattcctcagtcacagattacgcctcca
gtggcaccaacaacaacaacaacagcaaacaagtcaaaggtcccaggttttgttgctgca
tcggagcaatccatgcaagtgacgttaccatctcctcaggtagccacagtgaaacagtct
gccactactgctggatcaagtgatacttctccaggaacaccaacacagtcaaaacctgca
gagaaaaagaagccaacgtggacagagcataaatccccagatggcagaatatattggtat
aataatggaacaaaacagtcaacttgggagaaaccagatgaactcaaaacacatgcagag
ttgttactatcacagtgtccatggaaggagtacaagtcagataacggcaaggtgtatttt
cataatgtacaaacaaaggaatcaaagtggactatacctaaagatctagaagatttgaaa
gccaagatagaagcagaaggcctagacaaaaaaatgcctccagaacctgaagagccggaa
cctgaaccagagcctgaaccagaacctgtaccagtggcagtagctgctgcacctcagata
ccggtacgtgttctattggaaaaagaaatggaaggacaatcaacaccagtagctgcatca
tttactggtagtgatgtgggcacagcagagaatacacctacagtagcagatcaagatcca
gatagtgcggaagaacaagttccagagaagaaggagtatgtttataaaactaaagaggaa
gccaagaaagcattcaaggatttactccatgaaaaggaagtaccttctaatgccacgtgg
gaacaagccatgaagatgattgttatggatccacgatacacagctctcacaaagctgaat
gaaaaaaaacagttatttaataattataagacccagaaagccaaagaagaaaag
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