Saccoglossus kowalevskii (acorn worm): 100378423
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Entry
100378423 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49-like
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100378423
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100378423
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
Helicases
100378423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
100378423
NCBI-ProteinID:
XP_002735561
UniProt:
A0ABM0GR94
LinkDB
All DBs
Position
Un
AA seq
445 aa
AA seq
DB search
MADIELEDGVNAKFSSLGLNDWLVKQCKAVGITKPTPIQYYCIPQILEGVDCLGCAKTGS
GKTAAFALPILQKLCEDPYGIYALVLTPTRELAFQIAEQFRILGKPIGLKDAVIIGGRDV
MRQGMDLADKPHVVIATPGRLADHINSSNTFSLKKIKFLVLDEADRLLEDTFAEDLQVIF
DALPEKRQTLLFSATLTDKLEKLQTLALNKPFFWQSKAEIATVEQLDQKYVLIPAKVRDA
YLVHILQKICSETEDYSMIIFSNTCKNCQSLYLMLKALEFPCTPLHSMIPQRDRIASLAQ
FKSGRVRILLATDVASRGLDIPIVQLVVNHNVPWSPIDYVHRVGRTARAGRGGMALTLMT
QYDVKLIEAIEKQINTKLTEYPVDDKEVLTILNEVSVAKREAEMRLEEQDFGERKTINKR
KKLIREGRNPDKVLNKKKKRRKEKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccgacattgagctcgaagatggtgtgaacgcgaaattttccagcttaggactgaat
gactggttggtgaaacagtgtaaagctgttggtattacaaaaccaacacctatacaatac
tactgtataccccaaattcttgaaggtgttgactgtttagggtgtgctaaaactggtagt
ggtaagacggctgcttttgctttaccaatattgcaaaaactttgtgaagatccctatggt
atatatgcacttgttttgactccaacacgggaattagccttccagattgcagaacaattt
agaatattgggtaaaccaataggtttgaaagatgctgttatcattggaggtagagatgtc
atgcgccaagggatggatcttgctgataaaccacatgttgtcatagcaacacctggtcga
ttggctgatcatattaatagttccaacacatttagtctgaagaaaatcaagtttttagta
cttgatgaagccgacaggcttttagaagacacatttgcagaggatcttcaagttatattt
gatgctcttcccgagaagcgacagacgctactattcagtgccacgttgacggataaactt
gaaaaactgcagacattggctttgaataaaccattcttctggcagtccaaggcagaaata
gctacagttgaacaactagatcagaaatatgtgcttattccagcaaaagtgagagatgca
tatttagttcacattttacaaaagatttgctctgagacggaagattattcaatgattata
ttttcaaatacgtgcaaaaattgtcagtcattgtatttgatgttgaaagcattggagttt
ccatgtactcctctgcattctatgatacctcagcgagatcgtattgcatcgctagcacag
ttcaaatctggaagagtacgaatattgttagcaacagacgtagccagtagaggacttgat
attccgattgtacaactggtggttaatcacaatgtaccatggtctcctattgattatgta
catcgcgttggaagaactgctcgagcaggtcgtggtggaatggctttaactctgatgacg
caatatgatgtcaaattaattgaggcaatcgaaaaacagatcaatacaaaattaactgag
tatccagttgatgacaaagaggttttgacaatacttaatgaagtctctgttgcgaaaaga
gaagctgaaatgagactggaggaacaagactttggagagaggaaaacaataaacaagaga
aagaagctcataagagaaggaaggaatccagataaagtattaaataaaaagaagaaaagg
agaaaagaaaaaaaatga
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