Saccoglossus kowalevskii (acorn worm): 100378467
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Entry
100378467 CDS
T04123
Symbol
RC3H2
Name
(RefSeq) roquin-1-like
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100378467 (RC3H2)
04121 Ubiquitin system [BR:
sko04121
]
100378467 (RC3H2)
Transcription factors [BR:
sko03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100378467 (RC3H2)
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100378467 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_UBOX
zf-RING_5
zf-CCCH
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Prok-RING_4
zf-CCCH_4
zf_CCCH_4
zf-CCCH_UNK
zf-RING_10
Baculo_IE-1
Flagellin_arch-type
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
100378467
NCBI-ProteinID:
XP_006816479
UniProt:
A0ABM0M8Y8
LinkDB
All DBs
Position
Un
AA seq
1228 aa
AA seq
DB search
MPIQAPQWTEFLLCPICYNDFDDNVRLPISLVCGHTVCRTCLAQLHRKQCPFDQSNISAD
INSLPANYALLQLVGVEIPKTVELPSGLSSQHLKQYEESKSCVEEMALLLQPLSKVNVGS
KECVLSRPMQRKLVTLVNCQLVEDEGRARAVRAARSLGERTVTELILQHQNPQQLSANLW
AAVRARGCQFLGPAMQEECLKLVLLALEDGNALSRKVLVLFVVQRLEPQFPQASKTSVGH
VVQLLYRASCFKVTKREEDSSLMQLKEEFRSYEALRREHDSQIVQIAMEAGLRISPEQWS
SLLYGDASHKSHMQSIIDKLQTPASFAASVQELSIALQRSGDPANLARLTEDFELLANID
PAPDSAIPSWEESQRSMRAAKTAVLGLVDFVQNHSHHRKVLEQAQNSKYKTSLCRDVQQS
GGCPRAANCTFAHSPEELERFRAKSRRTHIKGKVEKKIEGGGSKPLTESSNENLLARGPD
TMTLDNDFPSFCDDEMSTNSSPFISPCTSGMSSPIPLSLGRNSPIPEKEKYPRCDYSSVY
ENSQAPHLEVSYKEPIDHRRYSPHPTYSSCELGYKVPESRHLHPSDPYYKSIASPHPRYV
PDDIFGRAPPSRFVDDAYHGRYVPMGYNVAEGNPRGCIPSGAPPYAPEIKGYTRHLDQYP
MYRQRNQTDPPPPDTPGSGYSGTSSNPVHRLSMYQLQDKREHLMAKLDPNYESHQQTRPF
NTTPESSTAIVSSILSTVAGMINSKAKSTGHGNRSLTQLTTSQHLVSSSGVNLQDMARRD
TTSSNKDSRYAGQYYNPWSSNPVLNIAPPTTGIPTISKTIVRHVSLEEGESVPGFGRNEQ
GNNEMPPKPGHDHHSCVEDVNRGRRIRREMEQMAIEKQRIKDNDSLCHDPKDLLNPIKRM
SKSIFHETDPVQAMPTCYTPTTAVMAYQDSQMSSTVQQFSPGKHLSYEDKVNASSTETPI
TSATVWYSDLVDRVVTPTPPVEKQQIRLELQQVDKQIRQKQHDIVIQKAQDTLILHREEQ
AMSAHKDPYNCPPSINDELLARKLQEVELGIQKKTLVEPSKSDETVDDVAIATWLQQDEM
EGRPSVNDANELKPEQCLPANVRLQQQQNDHQFAEQLVYQEAQAYGIRVAPQYADYHPRT
EVVQPNYFVGNGRQVPPPPPPPPPQQHGNPVPGAPYYYPQRVGRYVSPCPAPPPPSAIKD
PNYAWMTTLPSNVVEDPWNDLYQSYKQQ
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccaggctccacagtggacagaatttttactctgcccgatatgttacaatgac
tttgacgacaatgtccgcctgcctatcagtcttgtgtgcggacacactgtttgccgtaca
tgtctggcacaactccatcgcaagcagtgtcccttcgatcagagcaacatcagtgccgac
ataaattccctccctgccaattatgctctgttgcagttggttggtgtagagatcccaaag
actgtggaattaccgagcggtttatcatcgcaacatctaaaacagtatgaagaaagcaag
agttgcgtggaggaaatggcacttctgttgcagccactcagcaaagtcaatgttggttcc
aaggaatgtgtacttagtcgtccaatgcagagaaagcttgtcacccttgtcaactgtcag
ctggttgaagacgaaggcagagcccgtgctgtacgtgctgctcgttctctgggagagcgc
acggtaactgaacttatcttgcagcaccagaacccccaacagttatcggccaatttatgg
gcggctgtacgagcaagaggatgtcagtttcttggaccagccatgcaagaagaatgtttg
aaactggtgttgttagctttagaagacggcaatgccctgtcaaggaaagtattggtcttg
tttgtggttcagcgacttgaaccgcaatttccccaagcatcaaaaaccagtgtaggtcac
gttgtgcagttactgtaccgagcttcctgcttcaaagtcaccaagcgagaggaggattcc
tctttgatgcagttaaaagaagagttccgttcttatgaagcgctccgacgagaacacgac
tcgcagattgtgcagatcgccatggaggccggtttacgtatatccccagagcagtggtcg
tcattgttatacggcgatgcatcgcacaaatcacatatgcaatcaattatagacaagctg
cagactccagcctcctttgctgcaagtgtacaggaactgtctattgctcttcagaggtca
ggtgaccctgcaaatctagcacgattgactgaagattttgagttactagcaaacatcgat
ccagcaccagattcagctataccgagttgggaggaaagtcagcgttccatgcgtgctgct
aaaactgctgttttagggttagtggattttgtacagaaccatagccatcacagaaaagta
ctggaacaggcacagaatagtaagtacaagaccagtttatgccgtgatgttcagcaaagt
ggaggatgcccacgtgctgctaactgtacatttgcacattctccagaggaactagaaaga
ttccgtgcaaagagcagaagaactcacattaaagggaaagtggagaaaaaaatagaaggg
ggaggtagcaaaccgctaacagaaagcagtaatgaaaatctacttgctaggggtccagat
accatgaccttggataacgatttcccatcattttgtgatgacgaaatgtcaactaattcc
tctcctttcatcagtccatgcaccagtggaatgtccagccctatacctttgtcgctggga
agaaactcaccaataccagagaaggaaaagtaccccagatgcgattattcctcagtctat
gaaaactcacaagcaccgcatttagaagtttcctacaaggaaccgattgaccatcgtcgg
tattcacctcatccaacatattcttcttgcgagttgggctacaaagttccagaatcaaga
cacttacatccgtcggatccgtattacaaatcaatcgcttcaccacatccaagatatgtt
ccagatgacatctttggaagagcaccaccttcacgttttgtggatgatgcttaccatggg
agatatgtccccatgggatacaatgtagctgagggaaatcccagaggttgcattccttct
ggtgccccgccatatgctcctgaaatcaaagggtacacaagacacctggaccagtatcca
atgtataggcaaaggaaccagactgatccgccaccaccagatactcctggctctggctat
tctggcacatcgtctaatccagtacatagactctctatgtaccagttacaggacaaaaga
gaacatttaatggccaagttagatccaaattatgaatctcatcagcaaaccagaccattt
aacacaacccctgaaagttctactgctattgtctcctctatactgagtacagtcgctggc
atgattaattctaaggcaaaaagcactggtcatggaaatcgttctctgactcaactaact
acatcccagcatctggtttcaagttctggcgtcaatttacaagacatggcaagacgagat
acaaccagttccaacaaggactccagatatgctggtcagtactataatccatggtcgagt
aatccggttttgaacattgccccacctaccacgggaattccaaccatcagtaaaaccatc
gtccgccatgtttcattggaagaaggggagagtgtgcctggatttggaagaaatgaacaa
ggaaataatgaaatgcctccaaagcctggacatgatcaccattcgtgtgttgaagatgtt
aaccgtggccgaagaatacgtcgggaaatggagcaaatggccattgagaaacaaagaatt
aaagataatgatagtttgtgccatgaccccaaggatttactgaatccaatcaagcgaatg
tcaaagtcgatctttcacgagaccgatcctgttcaagctatgccgacatgttatacacca
accacagctgttatggcataccaggattctcagatgtcatcgactgtgcagcagttctct
cccgggaaacatctctcttatgaagataaagtaaatgcttcgagcacagagacgccgatc
acttctgcaacagtgtggtattcagatctggttgacagagttgtgactcctacacctcct
gtagagaaacaacagatcaggttggaattacagcaagtcgataaacaaattagacagaag
caacacgatattgttattcagaaagcgcaagacacactgattctgcacagagaagagcaa
gccatgtctgcccacaaggatccatataattgtccgccatccatcaatgatgaactcttg
gccagaaaactacaagaagttgagttgggtatacagaagaaaacacttgttgaaccctcg
aaatccgatgaaactgtggatgatgttgccatagcaacatggcttcagcaagatgaaatg
gagggtagaccatctgtcaatgatgccaatgaacttaaacctgagcagtgcctgcccgct
aacgtgcgcttacagcaacaacaaaacgatcaccagtttgcggaacagttggtttatcag
gaagcccaggcatatggtatacgagtagcccctcaatacgctgactaccacccccgtact
gaagtggtccagcccaactattttgtgggtaatggcagacaagtaccaccaccaccacca
ccaccaccaccacaacaacatggcaacccagtacctggtgctccatactattatccgcag
agggttggtaggtatgtttcaccatgtccggcaccaccaccaccatcagccatcaaagat
cctaactatgcttggatgacaactttgccgtcaaatgttgttgaagacccctggaatgac
ttgtatcagagttataaacaacagtaa
DBGET
integrated database retrieval system
