Saccoglossus kowalevskii (acorn worm): 100378492
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Entry
100378492 CDS
T04123
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100378492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100378492
Spliceosome [BR:
sko03041
]
Complex B
Other components
Prp19-related factors
100378492
Complex C
100378492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_occluded
RRM_YTH1
zf-CCCH_2
Nup35_RRM_2
zf-CCCH
zf-CCCH_4
RRM_3
Motif
Other DBs
NCBI-GeneID:
100378492
NCBI-ProteinID:
XP_002741428
UniProt:
A0ABM0H0E4
LinkDB
All DBs
Position
Un
AA seq
429 aa
AA seq
DB search
MAASKSTNTYNRQNWEDAEFPILCQTCLGDNPYVRMTKEKYGKECKICARPFTIFRWCPG
ARMRFKKTEVCQTCSKVKNCCQTCLLDLEYGLPLQVRDAALSIKDDMPKSDVNKEYYTQN
MEREIANSDGTQAVGAVGKSQSPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGVNDPVAHKLLNRAATMPKLEAPEDRTITTLYVGGLG
DKISEKDLRDHFYQFGEIRSINVVARQQCAFVQFTTRQSSELAAERSFNKLIMNGRRLNI
KWGRSQAQQALMGKKDGEFKDIVQLEPVPGLPGALPLPPTDGGDEGSRNYFNLPQHPPPL
MPPPMPHLVSMPPPPGYTGPPPPLPGFPRLPPPLRPPGFPPSTTTQPSQQQAVHYPSQDP
QRMGAVQQS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgagtaagagtacaaatacttacaacagacagaattgggaagatgcggagttt
ccaattctttgccagacgtgtttgggagataatccctatgtgagaatgactaaagagaag
tatggcaaggagtgcaagatttgtgctagaccgtttacgatcttcaggtggtgccctggt
gcaaggatgagatttaaaaaaacagaagtttgccagacctgtagtaaagtgaaaaactgt
tgccagacttgtttgttagatttggaatatggtttaccgctacaagtacgagatgcagct
ttgagtataaaagatgatatgcccaaatcagatgttaataaagaatattatacacaaaat
atggaaagagaaattgctaattccgatggcactcaggctgttggagcagttggaaaatca
cagtccccaagcgacttgttgttaaagctagccagaacaaccccttactacaaaagaaac
cgaccacatatatgttctttctgggtcaaaggtgaatgtaaaagaggtgaagagtgcccg
tacaggcacgaaaagcctacagaccctgatgatccactggccgatcaaaatatcaaagac
cgattctatggcgtcaatgatcctgttgctcataaattgcttaaccgtgctgcaacgatg
cctaaattggaagcaccagaagatagaactatcactacgttatatgtaggtggacttggt
gataaaatttctgaaaaagatctcagagatcatttttaccagtttggtgaaattcgcagc
attaatgttgtagctagacaacagtgtgcatttgtacagttcacaactcgacagtcttcc
gagctggccgctgaaagatcattcaataaactgataatgaatggtagacgtctgaatatc
aaatggggacgatctcaggcacagcaagctttgatgggtaaaaaagacggagaattcaag
gatattgtacaactggaaccagtgccggggctacctggtgcgttgccactcccacctaca
gatggcggtgatgagggaagtcggaattattttaatcttccccaacatcctccaccattg
atgccacccccaatgccacatctggtgagcatgccaccaccaccaggttacactggtcca
ccacctccactgccaggatttccacgtctgccaccacccctcagaccacctggtttccct
ccaagcactacaactcagcccagtcaacaacaggcagttcactacccttcacaggatccg
cagcgtatgggtgcagtgcagcagtcttaa
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