Saccoglossus kowalevskii (acorn worm): 100378514
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Entry
100378514 CDS
T04123
Symbol
RAD54B
Name
(RefSeq) RAD54 homolog B (S. cerevisiae)
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100378514 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sko03400
]
100378514 (RAD54B)
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100378514 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
ZGRF1-like_N
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100378514
NCBI-ProteinID:
XP_006815167
LinkDB
All DBs
Position
Un
AA seq
759 aa
AA seq
DB search
MQSKYYNVMWGKRSNKKHKKWEGDAILITKERSVKLLDMEGKEIGRSAGYKLSDLEDLKE
GQTLNVGGKEIEVMNSISEEDWSTGQCFSTSGQQNESIVDANKPHFSKPFRNPQQGADSI
QKPKPVTVTPKFDPMSPGALVMPRPSPTHQWQYNQHNLPIIDVVVDPHLSTHLRPHQRAG
VLFMYECIMGMKPSMGQGAILADAMGLGKTLQSITLIWTLLKQGPYGGKPVVKRVLIVTP
SSLVKNWSQEFRKWLGKERIMVYSAGSDKPAKDFGQSTIYPVMIISYELLMKSIKVIQNV
QFDIMICDEGHRLKNSNIKTTSMISNLDVKRRIVLTGTPIQNDLQEFFSIVEFCNPGALG
TSSGFKRVYEDPIVKGHQPNASQDELLLGETRANELARLTASFTLRRTQEVNTNYLPPKV
ESVVFCRPSKLQLKVYNQLISSSIIRSVLTSSYNGMTHLLCLSALKKLCNHPVFVYRHAK
LQDETCVDGEENVQEILYRDVCSSFPERYRDESNAVDYTDSGKLIVLAAMLKSFHNDTPQ
QRVVVVSNYTQTLDLLQQLCDKEGYTYGRLDGSTPTATRQDIVNRFTSKYSDQFVFLLSC
KAGGVGLNLIGAARLILYDIDWNPANDLQGSIEEKIYQRQISKQGLSGAVVDYRKDNNTK
FSQADLKDLFSLHENTDCVTHDLLDCQCSHQTESEPSNSSHSKNASMAELARWQHHCPPF
DDSLHDSHLLEVARHEGAVSFVFQTQTNHSTQSTVPRNV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaaatactataacgttatgtggggaaaacgatcaaataagaaacataaaaaa
tgggaaggcgatgctatattaatcactaaagaaagaagtgtgaaattattggacatggaa
ggcaaggagattggtcgcagtgctggatataaattatcagacttggaagatttaaaagaa
ggacagacgctgaatgttggtggtaaagaaattgaggtgatgaactcaatctctgaggag
gattggagtactggtcagtgcttttcaaccagtggtcaacagaatgaaagtattgtggat
gcaaataaaccacattttagtaaacctttcagaaatcctcaacaaggtgcagacagtata
cagaaacctaaacctgttacagtaaccccaaagtttgaccctatgtcacccggtgcattg
gttatgccaagaccaagtcccactcatcagtggcaatataatcagcacaatttaccaatc
attgatgtcgtcgtcgacccacatctgtctacacatctcagaccacatcaaagagctggc
gtattgtttatgtatgagtgcattatggggatgaagccatctatgggacaaggtgctata
ttggcagatgcaatgggtcttggaaaaacgctacaaagtataacactgatctggacattg
ttaaaacaaggaccatatggaggtaaaccagttgtaaagagagtactcattgtaacacca
agcagtttagtaaagaactggagccaagaattcagaaaatggttaggaaaggaaaggatt
atggtgtattctgctggatccgataaacctgctaaggattttggccagtctacaatctac
ccagtgatgataataagttatgaattgttgatgaaatctattaaagttatacagaatgtc
cagtttgatataatgatctgtgatgaggggcatagactgaaaaatagtaatatcaaaaca
acctcaatgatttcaaaccttgatgtaaaacgtagaattgtattaacaggcacgccaata
cagaacgatttgcaggaattcttttcaattgtagagttttgtaatcctggcgcactaggt
accagtagtggatttaagagagtctatgaagaccctatagtgaaaggtcatcaacctaat
gccagtcaagacgagctgttgttaggggaaaccagagctaatgagcttgcccgactcacg
gctagttttacgctaagaagaacacaggaagtgaatactaattacctcccgcccaaagtt
gaaagtgtagtattctgtcgtccttctaaactacaactcaaagtctacaatcagttgata
tcatccagcattatcagatctgttctcacctctagctacaatggaatgacccatctactg
tgtctgtctgctttaaagaaactatgtaaccatccagtatttgtgtatagacatgccaaa
ctacaagatgagacatgtgttgatggagaggaaaatgtccaggaaatcctgtacagggat
gtatgttcttcatttcctgaaaggtacagagatgaaagcaatgctgtcgattacacagat
agtggaaaactcattgtattagcagcaatgttgaagtcatttcataatgataccccccag
cagagagtggtagtggtatctaattacacacagacccttgacttacttcagcagctgtgt
gataaagaaggttacacttatggtagactggatggtagcactcctactgctacaagacag
gatattgtgaatagatttacttctaaatactcagatcaatttgtgtttttactgagttgt
aaggctggaggtgttggtctaaatctcattggtgctgccagacttattctctatgatatt
gactggaaccctgcaaatgatttacagggtagtattgaagagaaaatttatcagcgacag
atatcaaagcaaggactcagtggagctgttgtggattataggaaagataataataccaaa
ttttcacaagctgatcttaaggatttattcagtttacatgagaacaccgactgtgttaca
catgatttactggattgtcagtgcagtcatcaaacagaaagtgaaccaagtaactcatca
cattcaaagaatgcatctatggctgaattggctagatggcaacaccattgcccacctttt
gatgatagcttacatgattcacatcttttagaagttgcaagacatgaaggtgcagtcagt
tttgtatttcaaacacagacaaatcattccacacagtcgactgtgccgagaaatgtctga
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integrated database retrieval system