KEGG   Saccoglossus kowalevskii (acorn worm): 100378514
Entry
100378514         CDS       T04123                                 
Symbol
RAD54B
Name
(RefSeq) RAD54 homolog B (S. cerevisiae)
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100378514 (RAD54B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sko03400]
    100378514 (RAD54B)
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     100378514 (RAD54B)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII SWI2_SNF2 ZGRF1-like_N HDA2-3
Other DBs
NCBI-GeneID: 100378514
NCBI-ProteinID: XP_006815167
LinkDB
Position
Un
AA seq 759 aa
MQSKYYNVMWGKRSNKKHKKWEGDAILITKERSVKLLDMEGKEIGRSAGYKLSDLEDLKE
GQTLNVGGKEIEVMNSISEEDWSTGQCFSTSGQQNESIVDANKPHFSKPFRNPQQGADSI
QKPKPVTVTPKFDPMSPGALVMPRPSPTHQWQYNQHNLPIIDVVVDPHLSTHLRPHQRAG
VLFMYECIMGMKPSMGQGAILADAMGLGKTLQSITLIWTLLKQGPYGGKPVVKRVLIVTP
SSLVKNWSQEFRKWLGKERIMVYSAGSDKPAKDFGQSTIYPVMIISYELLMKSIKVIQNV
QFDIMICDEGHRLKNSNIKTTSMISNLDVKRRIVLTGTPIQNDLQEFFSIVEFCNPGALG
TSSGFKRVYEDPIVKGHQPNASQDELLLGETRANELARLTASFTLRRTQEVNTNYLPPKV
ESVVFCRPSKLQLKVYNQLISSSIIRSVLTSSYNGMTHLLCLSALKKLCNHPVFVYRHAK
LQDETCVDGEENVQEILYRDVCSSFPERYRDESNAVDYTDSGKLIVLAAMLKSFHNDTPQ
QRVVVVSNYTQTLDLLQQLCDKEGYTYGRLDGSTPTATRQDIVNRFTSKYSDQFVFLLSC
KAGGVGLNLIGAARLILYDIDWNPANDLQGSIEEKIYQRQISKQGLSGAVVDYRKDNNTK
FSQADLKDLFSLHENTDCVTHDLLDCQCSHQTESEPSNSSHSKNASMAELARWQHHCPPF
DDSLHDSHLLEVARHEGAVSFVFQTQTNHSTQSTVPRNV
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgcagtcaaaatactataacgttatgtggggaaaacgatcaaataagaaacataaaaaa
tgggaaggcgatgctatattaatcactaaagaaagaagtgtgaaattattggacatggaa
ggcaaggagattggtcgcagtgctggatataaattatcagacttggaagatttaaaagaa
ggacagacgctgaatgttggtggtaaagaaattgaggtgatgaactcaatctctgaggag
gattggagtactggtcagtgcttttcaaccagtggtcaacagaatgaaagtattgtggat
gcaaataaaccacattttagtaaacctttcagaaatcctcaacaaggtgcagacagtata
cagaaacctaaacctgttacagtaaccccaaagtttgaccctatgtcacccggtgcattg
gttatgccaagaccaagtcccactcatcagtggcaatataatcagcacaatttaccaatc
attgatgtcgtcgtcgacccacatctgtctacacatctcagaccacatcaaagagctggc
gtattgtttatgtatgagtgcattatggggatgaagccatctatgggacaaggtgctata
ttggcagatgcaatgggtcttggaaaaacgctacaaagtataacactgatctggacattg
ttaaaacaaggaccatatggaggtaaaccagttgtaaagagagtactcattgtaacacca
agcagtttagtaaagaactggagccaagaattcagaaaatggttaggaaaggaaaggatt
atggtgtattctgctggatccgataaacctgctaaggattttggccagtctacaatctac
ccagtgatgataataagttatgaattgttgatgaaatctattaaagttatacagaatgtc
cagtttgatataatgatctgtgatgaggggcatagactgaaaaatagtaatatcaaaaca
acctcaatgatttcaaaccttgatgtaaaacgtagaattgtattaacaggcacgccaata
cagaacgatttgcaggaattcttttcaattgtagagttttgtaatcctggcgcactaggt
accagtagtggatttaagagagtctatgaagaccctatagtgaaaggtcatcaacctaat
gccagtcaagacgagctgttgttaggggaaaccagagctaatgagcttgcccgactcacg
gctagttttacgctaagaagaacacaggaagtgaatactaattacctcccgcccaaagtt
gaaagtgtagtattctgtcgtccttctaaactacaactcaaagtctacaatcagttgata
tcatccagcattatcagatctgttctcacctctagctacaatggaatgacccatctactg
tgtctgtctgctttaaagaaactatgtaaccatccagtatttgtgtatagacatgccaaa
ctacaagatgagacatgtgttgatggagaggaaaatgtccaggaaatcctgtacagggat
gtatgttcttcatttcctgaaaggtacagagatgaaagcaatgctgtcgattacacagat
agtggaaaactcattgtattagcagcaatgttgaagtcatttcataatgataccccccag
cagagagtggtagtggtatctaattacacacagacccttgacttacttcagcagctgtgt
gataaagaaggttacacttatggtagactggatggtagcactcctactgctacaagacag
gatattgtgaatagatttacttctaaatactcagatcaatttgtgtttttactgagttgt
aaggctggaggtgttggtctaaatctcattggtgctgccagacttattctctatgatatt
gactggaaccctgcaaatgatttacagggtagtattgaagagaaaatttatcagcgacag
atatcaaagcaaggactcagtggagctgttgtggattataggaaagataataataccaaa
ttttcacaagctgatcttaaggatttattcagtttacatgagaacaccgactgtgttaca
catgatttactggattgtcagtgcagtcatcaaacagaaagtgaaccaagtaactcatca
cattcaaagaatgcatctatggctgaattggctagatggcaacaccattgcccacctttt
gatgatagcttacatgattcacatcttttagaagttgcaagacatgaaggtgcagtcagt
tttgtatttcaaacacagacaaatcattccacacagtcgactgtgccgagaaatgtctga

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