Saccoglossus kowalevskii (acorn worm): 100378565
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Entry
100378565 CDS
T04123
Symbol
CTR9
Name
(RefSeq) Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100378565 (CTR9)
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100378565 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_CcmH_CycH
TPR_14
TPR_8
TPR_16
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
ARM_TT21_5th
TPR_7
ANAPC3
ARM_TT21_C
TPR_Slam
ARM_TT21_4th
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
100378565
NCBI-ProteinID:
XP_002733846
UniProt:
A0ABM0GNH5
LinkDB
All DBs
Position
Un
AA seq
1197 aa
AA seq
DB search
LEYYKQGATEEFVKIFEASRTDANTEYKDHETHQMTALDTLAAYYVQQARKEKSKDVKKE
LFTQATRLYTMADKIIMYDQNHLLGRACFCLFEGDKMDQADAQFNFVLNQSPNNIPSLLG
KACISFNKKDFRGALAYYKKALRTTPNCPAAVRLGMGHCFMKLSKLDKARLAFERALQLE
PSCVGAIVGLAILELNSKEPDSIKKGVQLLSKAYTIDSSNPMVLNHLANHFFFKKDYNKV
QHLALHAFHGTENEFIQAESCYQLARSFHVQGDYDQAFQYYYQSTQFASAPFVLPFFGLG
QMYIYRGDMENAAQCFEKVLKSQPGNYETMKILGSLYATSPDQEKREIAKGHLQKVVEQF
PDDVEAWIELAQILEQSDVQGALSAYGTATRILKEKVQADVPPEILNNVGALHFRLGNLK
ESKRYYEASLERSKHEAQHDETYYSAISVTTTYNLARLREATCAFDKAEQLYKNILREHP
NYVDCYLRLGCMARDSGQIYDASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKF
ERILKQPSTQSDAYSLLALGNVWLQTLYQPTRDKDKEKRHQDRALAMYKQVLRNDGKNIY
AANGIGAVLAQKGYIREARDVFSQVREATADMRDVWLNLAHIYVEQKQYISAIQMYENCL
RKFYKYHNTEVMLYLARAYFRAGKMMDCKKVLLKARRVSPNDTVLLYNIALVMQRLAMGI
LKDEKSNLKTVLGAVHELELAHRYFTYLSKAGDRMKFDLNQAAVEARQCSDLLSQAQYHV
ARARRQDEEEKAIRAQQAAERDALRKKQLEEKIAKEKQIEVKAQELLEKRQQFVEKTKNM
IMLPEEEERKPSRKGRKKKDGDIFSEGSDSDVDAERPRKKKRRRKDSGSDEEGASPSRAK
ERKKRRQRKERSGKNKGGKRRRPDTEIMEEENMMSANMKKKVKSKAIISSSEGSDSDEGG
LKIAVPSGSESEKEKSSPKKVGRIRRISSSSSDENSDSEGEKARGSGSERGSASDRSGDE
NKSGNEKSGSGSDNESGGGQSDNESGGRSANEQSDNESGGGRSANEQSDNESGGGRSANE
QSGNESGGSGSANEQSDNESGGGQSANEQSDNESGGSGSANEQSDNESGGGQSANEQSDN
ESGGSGSANEQSDNESGGSGSANEESGNQESANESGGGSENEASGREQSGSEVSDSD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
cttgaatattacaagcaaggtgccaccgaggagtttgttaaaatttttgaggcatctcgg
accgatgccaatactgaatacaaagatcatgagacacaccagatgacagccttggacacc
ctggctgcttactatgtgcaacaagcaagaaaagaaaaaagtaaagatgtcaagaaagag
ctgttcacccaggctaccaggctttacactatggcagataaaattattatgtatgatcag
aaccatttgttgggcagagcttgtttctgtctttttgaaggggataaaatggatcaagcc
gatgcgcagtttaactttgtgctcaaccagtctcctaataacatcccctcactgctaggt
aaagcgtgcatttcttttaataagaaagacttcagaggagcgttggcatattataaaaaa
gctctaagaactacccctaactgcccagctgctgttcgtcttggtatgggacattgcttt
atgaaattgagcaaactagacaaagctagacttgcgtttgaaagagctttgcagttagaa
ccatcttgtgttggtgcaatagtaggtctggccattttggaactgaatagcaaagaacct
gactccatcaagaaaggtgtgcagttattatctaaagcctatactatagattctagtaac
ccaatggttctcaatcatcttgctaaccatttcttctttaagaaggactacaacaaagta
cagcatttggcattacatgcatttcatggtacagagaatgaattcatacaagctgagagc
tgttatcagctagccagatcgttccatgtacagggtgattatgaccaagcattccagtat
tattatcagtctacacagtttgcatctgcaccttttgtattaccgttttttggacttgga
cagatgtatatttatagaggagacatggaaaacgctgcacagtgttttgagaaagtattg
aaatcacagcctggtaactatgaaactatgaagatccttggttccctttatgctacttca
ccagaccaagaaaaaagagaaatcgctaaaggtcatttacagaaagtagttgagcagttc
ccagatgatgtagaagcgtggattgaactggcccagatattagaacaaagtgatgtccag
ggtgctctctctgcatatggtactgccaccagaatcctgaaagagaaagtccaagctgat
gtgccaccagagatcctcaataatgttggtgccttgcactttagattgggtaatttaaaa
gaatctaagagatactacgaggcctcactggagcgatccaaacatgaagcccagcatgat
gaaacatattacagtgccatctcagtgacaacaacttacaacttagcccgactacgtgaa
gccacatgtgcatttgacaaagctgaacagttgtacaagaatattcttcgagaacatcct
aattatgtagattgttacttaagacttggttgtatggcacgtgacagcggacagatctat
gatgcatcagattggtttaaagaagcgttgcagatcaatcaggatcatccggatgcatgg
tccttgattggtaaccttcatttagccaagcaagaatggggaccagggcagaaaaaattt
gaaagaattctcaaacagccatcaacacagagcgatgcctactcgttacttgcattggga
aatgtgtggctacagacattgtaccagccaactagagacaaagacaaggaaaaaagacat
caggaccgagcactggcaatgtacaaacaagtattacggaatgatggtaaaaatatctat
gctgccaatgggattggagctgtgctggcacagaaaggttacatcagagaagccagagac
gtcttctctcaggtgagagaagccactgctgatatgcgtgatgtatggttaaacttagct
catatttatgtggaacaaaaacagtacatcagtgctatacagatgtatgaaaattgctta
agaaagttttataaataccacaatacagaagtgatgttgtatcttgctagagcttatttt
agagctggaaaaatgatggactgtaaaaaagtgttactcaaggctcgacgtgtgtcacct
aatgatactgtattgttgtataacattgccttggtgatgcagagactggctatgggcatt
ctcaaagatgagaagagtaacctgaagactgtactcggtgctgtacatgagctggaacta
gcacatagatatttcacatatcttagcaaagctggggacaggatgaaatttgatttaaat
caggctgcagttgaggccagacagtgctcagatttgttgagccaagcccagtatcatgta
gccagagcccgtaggcaagatgaggaagagaaagcaatcagggcacaacaagcagctgaa
agggatgcccttcgaaaaaaacagctggaagaaaagattgccaaggagaaacagatagaa
gtaaaggcacaggagttgctggagaaaagacaacagtttgttgagaaaactaaaaatatg
atcatgttgcctgaggaagaagagagaaagccaagcagaaaaggacggaaaaagaaagat
ggtgacatttttagtgaaggtagtgacagtgatgtggatgccgaacgacccaggaagaaa
aagaggagaaggaaggacagtggtagtgatgaggaaggtgcaagtccaagcagagctaag
gagagaaaaaagagaagacaacgtaaagaacgaagtggcaagaacaaaggcggcaagaga
cgtagaccagacactgaaattatggaagaagagaatatgatgtctgctaatatgaaaaag
aaagtgaagtcaaaagccattatatcatccagcgaggggtctgattcagatgaagggggg
ttgaaaatagctgtaccaagtggtagtgaaagcgagaaagaaaagagcagccctaaaaaa
gttggtagaattcgtcgcatcagtagttccagttcagatgaaaatagtgacagtgaaggt
gaaaaagcaagaggttccggttctgaaagaggttcagctagtgataggtcaggtgatgag
aacaagtctggcaatgaaaagtctggatcaggatctgataatgaatcaggtggtgggcag
tcagataatgaatccggtggtcgatcagccaatgaacagtcagacaatgaatcaggtgga
ggccgatcagccaatgaacagtcagataatgaatccggtggtggccgatcagccaatgag
caatctggcaatgaatctggtggttctggatctgccaatgagcagtcagataatgaatcc
ggtggtggacaatcagccaatgagcagtcagataatgaatctggtggttctggatctgcc
aatgagcagtcagataatgaatctggtgggggacaatcagccaatgagcagtcagataat
gaatctggtggttctggatctgccaatgagcagtcagataatgaatctggtggttcagga
tcggccaatgaggaatcaggtaatcaggaatcagccaatgagtctggaggtgggtcagag
aatgaagcctcaggcagggagcagtctggaagcgaagtatcagatagtgactaa
DBGET
integrated database retrieval system
