Saccoglossus kowalevskii (acorn worm): 100378848 Help Entry 100378848         CDS       T04123                                  Name (RefSeq) vam6/Vps39-like protein-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko04140   Autophagy - animal sko04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sko00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100378848    04148 Efferocytosis     100378848  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sko04131]     100378848 Membrane trafficking [BR:sko04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     100378848 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_WDR19_1st HisKA NBCH_WD40 Motif Other DBs NCBI-GeneID:  100378848 NCBI-ProteinID:  XP_006825770 LinkDB All DBs Position Un AA seq 879 aa AA seqDB search MHDAYEAEPILEKLPLQIESIACHGKDVLLVGTKQGHLLVYSIKSASGDERFAVNLLRSN KSFAKKPIQQLTCVPEFQILISLSDNVISVHDLTGYSHITALNKTRGATLFAVDLQKEKS LSGGCTYKLRMCVAVKRKLQLFYWQNRDFHELQSDLGVPDVPKSMSWCVNSLCVGFKRDY FLIKLDGGLKELFPTGKQLEPTVTRLAEDKLALGRDEMSIFIDSEGAPTQKYALTWNDIP IIIEYDAPYMIAVLPRYVEIRTIEPRLLVQSIDLQKPRFITLGSGHVYIASSHFVWRLVP VPITVQIRELLQDKQFELALHLADMTDEVEADKQRRIQHIQNLYAFDLFSQHRFEESMQI FGKLGTDPAQVIGLFPDLLPQDYRNQLEYPSKPPELSGSELEKGLLGLIEYLTHKRNEIV KHMSQELSNPMAIVQGSTTIRSKKQLSQIVDTTLLKCYLQTNDALVAPLLRLKDNNCHIE ESERVLKKHQKYSELIILYQKKGLHRKALDLLLRQSQKPNSPLKGHDRTVQYLQHLGSDH FDLISDFALWVLKAYPEDGLKIFTEDTPEVDGLPRDKVLAYLEQNACTRDLAVPYLEHII LNCHEDNPEFHNKLIHLYRERVQVMMKDYILSLPEGQDPAKTGKEPGDLGELRNKLLFFL ETSLHYVPEKLLTYFPFDSFFEERALLLGRLGRHEQALAIYAHILKDTKMAEDYCRRNYD PDKEGNKNVYLCLLKMYINPPDASTLGVMVNAESAKPNIDASLCVLKLHQYKIDMAKALD LIPSTVQVKDVCKFLECVLEDGSAKKRNNQILKSLLYSEHLQVKEQKIYYQSSKCTITDE KICKVCKKKIGNSAFARYPNGIIVHFYCCKDRNFCPFDV NT seq 2640 nt NT seq  +upstreamnt  +downstreamnt atgcacgatgcatacgaggcagaaccgatcctggaaaagctcccgttgcaaatcgagtct atagcatgccacggtaaggatgtattactagttggtaccaagcaaggtcatcttcttgtc tatagcatcaaatcagcttcaggcgatgagagatttgcagtgaaccttttaagatctaac aaatcttttgctaaaaagccaatacaacaattaacctgtgttcccgaattccaaatactt atatctttatcagacaatgttatcagtgtccatgatctgactgggtattctcacattact gctctcaacaagacaagaggtgccacgttgtttgctgttgatcttcagaaagaaaaatct ctgagtgggggttgtacatataaacttagaatgtgtgtagctgtgaagcggaaactacag ttattttattggcagaatagggattttcatgaactgcagtctgacctaggtgtgccggat gttcccaaatcaatgtcgtggtgtgtcaattcattgtgtgttggttttaaacgagattat tttctgattaaacttgatggtggtttaaaagaactctttccgactggcaaacaattagaa cccacagttaccagactagccgaggacaaacttgctctaggacgggatgaaatgagtata tttattgactctgagggcgctccaacacagaaatatgctctgacgtggaatgacattccc atcattattgagtatgatgcgccgtacatgatagctgtcctaccaagatacgtcgagata cgtacaatagaacccaggttgttagtacaaagcattgacttacagaaaccaagatttatt acgctgggaagtggtcatgtatatatagcatctagtcattttgtctggcgtctcgtacca gtgcctattaccgtgcagattagagaattattacaggacaaacaatttgaattagcatta catttagcggacatgacagatgaagttgaagctgacaaacagagaagaattcaacatatt cagaatttatacgcatttgatttattttcacaacacagatttgaagaatccatgcagatt tttgggaaattaggcacagatccagcgcaagttatcggtctgtttcctgacttgctacct caagattatcgaaaccagttagaatatcccagtaaacctccagagctgtctggatctgag ctagaaaagggtttactgggactcatagaatatctaacacataagcgtaatgaaatagtg aaacatatgagtcaggagttaagtaacccaatggctatagtgcagggtagtacgactata cgatctaagaaacaactaagtcaaatagtggacacaacgttacttaaatgttatttacag acgaatgacgctcttgtagccccgctgttgagactgaaggacaacaactgtcatattgaa gagagcgagagggttttaaagaaacatcagaaatatagcgaacttataatcctctaccag aagaaaggactccacaggaaagcattggatttattactgagacaatcacagaaacccaac agtccacttaaaggacatgacaggacagtgcaatatttacaacatctaggtagtgaccac tttgatcttatctctgactttgcattgtgggtactgaaagcctatcccgaagatgggtta aagatatttaccgaagacacaccagaagttgatggtcttccacgtgacaaggtattagca tatttagaacagaatgcttgcaccagggatctggctgtaccatacttagaacatattata ctgaactgccatgaggacaaccctgagtttcacaataaacttatacatctgtacagggaa agagtacaagttatgatgaaagattatatcctgtctctacctgaaggacaagatcccgct aagactggtaaggaacctggtgaccttggtgaactcagaaataaactattatttttcctg gaaacatctttacattatgtgccagaaaagctactcacatatttcccatttgactcattc tttgaggagagagctctcttgcttggtcgcttaggaagacacgagcaggcccttgctatt tacgcacatatcttgaaggacaccaagatggctgaagattattgtaggaggaattatgat ccagataaagaaggaaataaaaatgtttatctgtgtcttttgaagatgtatatcaaccca ccagatgcctccacattgggagtcatggtgaatgcagagtcagcaaaacctaatattgat gcatcactgtgtgtattaaaattacatcaatataagatagatatggccaaggccctggat ctcatcccttctacagtgcaggttaaagatgtttgtaaattcttagaatgtgttttagaa gatggatcagctaaaaagagaaataaccagattttgaaaagccttctttattcagaacat ttacaggtcaaagagcagaagatctactaccaaagcagtaagtgcacaatcacagatgag aaaatttgcaaagtatgcaagaagaagattggaaacagtgcgtttgctagatatcccaac ggcatcattgtacatttctactgttgtaaagataggaatttctgcccctttgatgtttga

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