Saccoglossus kowalevskii (acorn worm): 100378894
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Entry
100378894 CDS
T04123
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100378894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100378894
Spliceosome [BR:
sko03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100378894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
HTH_67
Symplekin_C
ATP-synt_F6
Motif
Other DBs
NCBI-GeneID:
100378894
NCBI-ProteinID:
XP_002742415
LinkDB
All DBs
Position
Un
AA seq
467 aa
AA seq
DB search
MSLADELLADLEEIAEEGEEPEISNEQDDGIDDIQDVPMEMDTNSAESIKNIAKLRDGQQ
LKKIMAQIEYYEKKKTKSGAAGPVEADPEYQLIVEANNLTVEIDHEIDVIHKFCRDHYMK
RFPELESLVPGASDYMNTVKELGNKLEKAKTNEKLQEILTPAVIMIVSVSASTTQGQLME
EDELNRVYEACDMAMDLNEAKLKVLAYVESRMSFIAPNLSIIVGASTAAKLMGAAGGLSH
LSRMPSCNILVLGTQKKTMMGFSSTVTNPHTGYIYYCDLVQATPSDLRKKAARLVAAKCT
LAARVDSFQDTSLGEAGQTLREEIERKLDKLQEPPPVKQAKPLPAPIDPVRKKRGGRRLR
KMKEKYGMTEMRKAANRMTFGAIEEDAYQDAMGYSSGMIGKSGTGRIRGPQVDTKTQVKL
SKSLQRTLQKQQTYGGKSTVRGRETSGTASSVAFTPLQVDLLDEVCK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcggatgaattattagctgacttggaggagatcgcggaggaaggagaagaa
cctgagataagtaatgagcaggatgatgggattgatgacatacaggatgttcccatggag
atggacaccaacagtgcagagtccataaagaatattgcaaaactacgtgatggtcagcaa
ttaaaaaagattatggcccaaattgaatattatgaaaagaaaaagaccaaatcaggtgca
gctggacctgttgaggctgaccctgaatatcagttgattgtagaagccaataacctcact
gtagaaattgaccatgaaattgatgttatccacaaattctgtcgtgatcattatatgaag
agatttccagagttagaatcattggtacccggagcttccgattatatgaatacagttaag
gaacttggtaacaaattagagaaagcaaagacaaatgagaaactacaggaaattttgaca
ccagccgttatcatgatagtaagtgtatctgcatcaacgacacaaggacagttaatggag
gaagacgaattgaatcgtgtctacgaagcatgtgatatggctatggatctaaatgaagct
aaactaaaggtattagcatatgtagaatccagaatgtcgtttattgctcctaatttatcg
atcatagtaggtgcttccacggcagccaaattaatgggtgctgctggtggtcttagtcat
ttatcacgaatgccgtcatgtaatatattagtattaggaacacagaagaaaactatgatg
ggtttttccagtactgtcaccaacccacacactgggtatatttattattgtgatctagta
caggccactccatcggatcttcgaaaaaaagcagctaggcttgttgctgccaagtgtaca
ctagcagcccgcgttgacagctttcaggatacctctctcggtgaagctggacaaacacta
agagaagaaattgaaagaaagttagataaattacaggagcctcctccggttaaacaagct
aagccacttcctgctccaattgatcctgtcagaaagaagagagggggcagaagattaagg
aaaatgaaagagaaatatggtatgacagaaatgagaaaggcagcaaatagaatgacattt
ggtgcaattgaggaagatgcgtatcaggacgctatggggtattctagcggcatgatcggt
aaatcgggcacggggagaatacgtggtcctcaagtagacactaaaacacaagtcaagcta
tccaaaagtttacagagaacattacaaaaacaacagacatatggtggtaaatcaacagta
agaggacgagagacgtcgggtacagcatctagcgtggcatttacaccattacaggtagat
ttattagatgaggtttgtaagtga
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