Saccoglossus kowalevskii (acorn worm): 102802851
Help
Entry
102802851 CDS
T04123
Name
(RefSeq) collagen alpha-1(III) chain-like
Organism
sko
Saccoglossus kowalevskii (acorn worm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
TSP1_spondin
TSP1_ADAMTS
Pacifastin_I
TSP1_CFP_C
FnI_RECK
VWF
TIL_2
Motif
Other DBs
NCBI-GeneID:
102802851
NCBI-ProteinID:
XP_006814187
UniProt:
A0ABM0M2E6
LinkDB
All DBs
Position
Un
AA seq
1610 aa
AA seq
DB search
MVSITVNYTEYLPVDVWSPWTPWGDCSVTCNGGVQRRSRDCENPITGVISDKCDGIDIES
KPCNPDSCTGDEECTDGKVYVTDCGEIEVCPATCDDVSSPGSCVDPDACVPGCRCPLDTV
EQDGECVDQSECRCPFDMNAFTGVTLTFVSLVKTTVVTPQFAAPGEPGGPGGPQGPGGPG
GPGGPGGPDGPGGPEENPEDVGKPGKPLGPGGPGGPGGPGGPGGPGGPGGPGGPTLATDQ
TTPPGVGQPGGPGGPGGPGGPGGPGGPGGPDGPGGPNGPGGPNGPGGPNGPGGPNGPGGP
GGPTPTSEDEAEIPDNVGEPLGPLGPGGPGGPGGPGGPGGPGGPGGPDGPGGPDGPSLAP
GVTLPDDIGVSGGPGGPFGPGGPFGPGGPGGPFGPGGPGGPGGPELTTVITPAMAEPGEP
GGPGGPGGPGGPGGPDGPGGPNGPGGPNGPDGPGGPEVNPEDIGDPGKPLGPGGPGGPGG
PGGPGGPGGPGGPGGPTLATDETTPPDVGKPGGPGGPGGPGGPQGPGGPGGPDGPGGPNG
PGGPNGPGGPNGPGGPNGPGGPGGPTPTPEEELEIPDNVGEPLGPMGPGGPGGPGGPGGP
GGPGGPGGPDGPGGPDGPSLAPGVTLPDDIGVSGGPGGPYGPGGPFGPGGPGGPFGPGGP
GGPGGPELSTVITPAMAEPGEPGGPGGPMGPGGPGGPGGPGGPNGPGGPNGPDGPGGPEV
NPEDIGEPGKPLGPGGPGGPGGPGGPGGPGGPGGPGGPTLATDETTPPDVGKPGGPGGPG
GPGGPGGPGGPGGPNGPGGPNGPGGPNGPGGPNGPGGPNGPGGPGGPTPTPEEELEIPDN
VGDPLGPLGPGGPGGPGGPGGPGGPGGPGGPDGPGGPNGPSLPAEITLPKNIGQPDGPGG
PNGPGGPGGPGGPGGPYGPGGPGGPGGPVVIVAVTPVVTTVPPLGQYIDKDTMFHADCNN
CTCESGILNCTHLDCATPTPGVPISIPEVTTAPSDVWSPWTPWGDCSVTCNGGVQRRSRD
CENPITGVISDKCDGIDIESKPCNPDSCTDGPGGPNGPDGPGGPEVNPEDIGDPGKPLGP
GGPGGPGGPGGPGGPGGPGGPGGPTLATDETTPPDVGKPGGPGGPGGPGGPQGPGGPGGP
DGPGGPNGPGGPNGPGGPNGPGGPNGPGGPGGPTPTPEEELEIPDNVGEPLGPLGPGGPG
GPGGPGGPGGPGGPGGPDGPGGPDGPSLAPGVTLPDDIGVSGGPGGPFGPGGPFGPGGPG
GPFGPGGPGGPGGPELTTGPGEPGGPGGPGGPGGPGGPNGPGGPIVTPQFAAPGEPGGPG
GPQGPGGPGGPGGPGGPGGPGGPNGPDGPGGPEENPEDVGKPGKPLGPGGPGGPGGPGGP
GGPGGPGGPGGPTLATDQTTPPGVGKPDGPGGPGGPGGPGGPGGPGGPDGPGGPNGPGGP
NGPGGPNGPGGPNGPGGPGGPTPTSEDEAEIPSNVGEPLGPLGPGGPGGPGGPGGPGGPG
GPGGPDGPGGPDGPSLAPGVTLPDDIGVSGGPGGPFGPGGPFGPGGPGGPFGPGGPGGPG
GPELTTVITPAMAEPGKPGGPGGPMGPGGPGGPDGPGGPIKQFDPIPLKL
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatcacggtaaattacacagaatatttacctgtagacgtttggtcgccatgg
acaccatggggagattgttctgttacatgtaacggtggtgttcaacgaaggagtagagat
tgtgaaaatcctatcacaggggtgataagtgacaaatgtgacggtatagatattgagagc
aagccatgtaaccctgactcctgtacaggagatgaggaatgtactgatggtaaagtttat
gtgactgactgtggtgaaattgaagtatgtccagctacatgcgatgacgtatccagtcct
ggatcttgtgtagaccctgacgcatgcgtacctggatgtagatgcccattggatacagta
gaacaagacggtgaatgtgttgaccaatcagaatgtagatgtccatttgacatgaatgca
tttacaggagttactctcacatttgtatcactagtgaaaactacagttgtgacaccacaa
tttgcagctcctggggaaccaggtggaccaggaggaccacaaggtcctggtggaccaggt
ggtcctggaggtccaggaggtccagatgggcctggtggacctgaagaaaatcctgaggat
gttggcaaacctggaaaaccgcttggtcctggtggcccaggaggacctggaggacccgga
gggccaggaggaccaggaggtcctggaggaccaggaggaccaactcttgctactgaccag
acaacaccacctggtgtgggacaaccaggtggtcctgggggacctggtgggcctggagga
ccaggtggaccagggggaccaggtggcccagatgggcctggtggaccaaatggacctggg
ggaccaaatggaccaggtggtccaaatggacctggtggaccaaatggacctggtggtcca
ggtggaccaactccaacatcagaagatgaagcagaaattccagataatgtcggtgaacca
ttaggacccttgggaccaggtggacctggtgggccaggagggcctgggggtcctggggga
ccagggggaccaggtggacctgatggaccaggagggcctgatggaccatcattggctcct
ggagttactttacctgatgacattggtgtaagtggtggacctggtggaccttttggccca
ggagggccatttggacctggaggtcctggagggccgtttggacctggtggacctggaggt
ccaggtgggccagaactgactacagtaataacacctgcaatggcagagcctggtgagcca
ggtggtccagggggaccagggggaccaggaggaccaggtggacctgatggaccaggaggg
ccaaatggtcctgggggtccgaatgggcctgatggaccaggtggacctgaagtcaatcca
gaagacattggtgatcctgggaagccacttggtccgggtggacctggaggacctggaggg
ccaggtggaccagggggccctggaggaccaggagggccgggaggaccaacccttgctaca
gatgagacaacacctcctgatgtggggaaaccaggaggtcctggtggacccggtggccca
gggggcccacaaggtccaggtggaccaggtgggcctgatggccctggaggaccgaatgga
ccaggagggccaaacggacctggaggtccaaacggaccaggtggtccaaatgggcctggt
ggaccaggcggacccacaccgacaccagaagaagaactagaaattccagataatgttggt
gaaccattaggaccaatgggtcctggtggtcctggaggaccggggggtcctggaggacca
ggtggacctggtggacctggaggacctgatggacctggtggaccagatggtccgtcttta
gcacctggtgtaaccctacctgatgatattggtgtaagtggtggacctggtggtccttat
ggcccaggagggccatttggacctggtggtcctggaggaccatttggtcctggtggtcct
ggtggaccaggcggacctgaactgagtacagtaataacacctgcaatggcagaacctggt
gaaccaggtggaccaggaggaccaatgggaccagggggacccggtggaccaggtggacca
ggagggccaaatggccctggaggaccaaatggacctgatggacctggtggacctgaagta
aatccagaagatattggtgaacccggcaaaccacttggtcctggtggtccaggtggaccc
ggtgggccgggtgggcctggtggtcctggtggacctggaggtcctggaggaccaactctt
gcaacagatgagactacaccaccagatgttggtaaaccaggtggtcctggaggacccgga
gggccaggagggcctggagggcctggtggaccaggtggaccaaatggtcctgggggacca
aatggcccaggcggaccaaatggaccaggtggccccaatgggcctggtggaccaaatgga
cctggtggaccaggtgggcctacaccaacaccagaagaagaactagaaattcctgataat
gttggtgacccattaggacccttgggaccaggtggacctggagggccagggggtcctgga
ggacctggtgggcctggtggaccaggtgggcctgatgggccgggtggaccaaatggacct
tctctgcctgcggaaataaccctgcctaaaaatattggtcaacctgatggacctggagga
ccaaatggaccaggaggtcctggtggaccgggtggacctggtgggccttatggtccaggt
ggccctggaggccctggtggtcctgttgttatagtagcagtgaccccagtagttactaca
gtacctccacttggacaatacattgataaagatacaatgttccatgctgactgtaataat
tgtacctgtgaaagtggaattttgaattgtacacacctcgactgtgccactccaacaccg
ggtgtaccaataagtattccagaagtgacaacagctccttctgatgtttggtcgccatgg
acaccatggggagattgttctgttacatgtaatggtggtgtacaacgaaggagtagagat
tgtgaaaatcctatcacaggggtgataagtgacaaatgtgacggtatagatattgagagc
aagccatgtaaccctgactcctgtacagatgggcctgggggtcccaatgggcctgatgga
ccaggtggacctgaagtcaatccagaagacattggtgatcctgggaagccacttggtcca
ggtggacctggaggacctggagggccaggtggaccagggggccctggaggaccaggaggg
ccgggaggaccaacccttgctaccgatgagacaacacctcctgatgtgggaaaaccagga
ggtcctggtggacccggtggtccagggggcccacaaggtccaggtggaccaggtggacct
gatggtcctggaggaccaaatggaccaggagggccaaatgggccaggtgggccaaatgga
ccaggtggaccaaatgggcctggtggaccaggcggacccacacctactcctgaagaagaa
ctagaaattccagataatgtcggtgaaccattagggccgttgggtcctggtggtccagga
ggacctggaggtcctggaggaccaggtggacctgggggacctggggggcctgatggacct
ggtggaccagatggtccatctttagcacctggtgtaactctacctgatgatattggtgta
agtggtggacctggtggtccctttggcccaggagggccatttggacctggtggtcctgga
gggccatttggacctggtggtcctggagggccaggtgggcctgaactgactacaggccct
ggtgagccaggtggtccagggggaccagggggaccaggaggaccagggggacctaatgga
cccggagggccaattgtgacaccacaatttgcagctcctggggaaccaggtggaccagga
ggaccacaaggtcctggtggaccaggcggtccaggaggtccaggaggtccaggcggacct
ggtggacctaatggacctgatgggcctggtggacctgaagaaaatcctgaagatgttggc
aaacctggaaaaccgcttggtcctggtggaccaggaggacctggaggacctggtggacca
ggagggccaggaggtcctggaggaccaggaggaccaactcttgctactgaccagacaaca
ccacctggtgtgggaaagccagatggccctgggggacctggtggaccaggaggaccaggt
ggaccagggggaccaggtgggccagatggacctggtggaccaaatggacccgggggacca
aatggaccaggtggtccaaatggacctggtggaccaaatgggcctggtggaccaggtgga
ccaactccaacatcggaagatgaagcagaaattccaagtaatgttggtgaaccattagga
cctttgggaccaggtggaccgggtgggccaggagggcccgggggtcctggagggccagga
ggtccaggtggacctgatggaccaggagggcctgatggaccatcattggctcccggtgtt
actttacctgatgacattggtgtaagtggtggacctggtggaccttttggaccaggaggg
ccatttggacctggaggtcctggagggccgtttggacctggtggtcctggaggtccaggt
gggccagaattgactacagtaataacacctgcaatggcagagcctggtaaaccaggtggt
ccaggaggaccaatgggaccaggaggaccaggtggacctgatggaccaggagggccaatt
aaacagtttgatccaattcctttaaaactttga
DBGET
integrated database retrieval system