Saccoglossus kowalevskii (acorn worm): 102802870
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Entry
102802870 CDS
T04123
Name
(RefSeq) DNA repair protein complementing XP-C cells-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102802870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sko03400
]
102802870
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102802870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
ArdcN
Motif
Other DBs
NCBI-GeneID:
102802870
NCBI-ProteinID:
XP_006822482
LinkDB
All DBs
Position
Un
AA seq
1025 aa
AA seq
DB search
MPNTRRNKAKTSKAASEITAPTSAKRRRRGRENSREGVESKSVERNNDLTSQSAIKGTEN
GSKPMPTTRLRPATRKREVSLEERKSQHDKIDSGRVDFEELTFTPRSPTNLRERKNRKCR
NSKKNSQNEDNTISSPSHPNDEEPSQKSGKKCQIQQTKEKRDTLTFNKKPITLDKVGCNR
NKRKRKCEDAVAIEIKKDKDDQGSTGVGGRCDASTSEKFPRRDCSKEQMSSGDTEVTMET
NEKSDDSSDESDWEEVEELKAEQLVALKSQLPEKPLEITVDMPESMKMKRRKKYECDLLA
YFRRQMNRYNKEQRIELHKVHLLCLVASGFYQNEVCNDVTLTAIALSMLPQHFIQKKTNQ
WGVPLLTRLLKWYIHDIYFCTCKYNPNLSSETTNLGDKLIQRFENNMKVGSEMELVHIFV
IFLRVLQLDTRLVLSLQPMSYKVSNSPNKAGSKRKTLNEKDAKDKKNLKKSKMSQSLKKN
EEISEEDVDKPSTSKPSHQQQEEVVRPPRKRTLRPKNDRKRSYASKIQLDIESDDGEMSS
EEDVYVVSSSDESEEECTSRKRGKNVKKNVSTIKKSVECTDSKKSPRTKTVKRSSTDTSL
IEANSDSDFEPEIINLASGPRNTSPKATSNSKSKDSQRIKTGRDQWVEVYSLDSNEWICI
DCVTSTIAQPDACEKMATHPLSYVLAFDNDNHVKDVTSRYASKWMSHTRKQRVDEEWWQQ
TLTPYQLKDKDKSEKEDLALQVQLQQQPMPTSVAEYKNHPLYALKRHLLKFEGFYPENPK
VLGFCRGEPVYARECVHTLHTRETWLKEGRVVRVGEKPYKLVKARPKPKKKYQDTVKNEE
PTVPVFGRWQTEEYEPPLAVDGKVPRNEHGNVELFLPRMLPKGTVHLQIPGLNRVARKLN
IDCAQAMIGWDFHGGYCHPLFDGFVVCEEHQEMLLDAWQQDQQETERKEREKKEKRVLKH
WKLLIKGLLIRERLKKRFQTEDNLVLPSTSSNVKESAAPDLQMSWPLNKQLPKTDQNNLF
PFEKL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatacacgtaggaacaaagcaaagacttcaaaagctgcatcggagataactgct
ccaactagtgctaaacgcagacgtagaggcagggaaaactcacgcgaaggggtggaaagt
aaaagtgtagaaagaaataatgatttaacaagccaaagtgccattaaaggaactgaaaat
ggcagtaaacctatgcctacaacaagactcagaccagcaactaggaaaagagaagtatca
ctggaggagagaaagagccagcatgataaaatagatagtggcagagtggattttgaagaa
ctaactttcacaccaagatctccaacaaacttacgagaaaggaagaatagaaaatgtaga
aattcaaaaaagaacagtcagaatgaagataacactatctcatcaccttcacatccaaat
gatgaggagccgagccaaaaaagtggcaagaaatgtcaaattcaacaaaccaaagagaaa
agagatacacttacatttaataaaaaacctattacacttgacaaagttggttgcaatagg
aacaaaagaaagagaaaatgtgaagatgcagttgccatagaaataaaaaaagataaagat
gatcaagggtcaacaggtgttggtggaagatgtgatgcaagtacatctgagaagtttcca
agaagagactgttccaaggaacagatgagtagtggtgatacagaagttaccatggaaaca
aatgagaaatctgatgactcatcagatgaaagtgactgggaagaagtggaagaattaaag
gcagaacaattagttgctctgaaatctcagctgccagagaagccattggaaattacagtt
gacatgccggaatccatgaagatgaaaagaaggaagaaatatgaatgtgatttgcttgca
tattttcgacgtcaaatgaatcgatacaataaagaacaacgaattgagctgcataaggtt
catttgttatgtcttgttgccagtggtttctatcaaaatgaagtttgtaatgatgtgaca
ctgactgcaatagctctatctatgctaccacagcatttcatacagaaaaagacaaaccag
tggggtgttccactgttaacaaggctactcaaatggtatatacatgacatttatttctgt
acatgtaaatataatccaaatctatcaagtgaaactactaacttgggtgacaaactgata
caaaggtttgagaataatatgaaagttggttctgaaatggaattggttcatatttttgta
atctttctgcgagttcttcagctggacacaaggcttgtcttatcgcttcaaccaatgtca
tacaaagtttcaaactctccgaacaaagctggctcaaaaagaaaaacgttgaatgaaaag
gatgcgaaagataagaagaatttaaaaaaaagtaaaatgagtcagagtttgaagaaaaat
gaggaaatctcagaagaagacgttgacaaaccatcaaccagcaaaccctcacatcagcag
caggaagaagttgttagacctccaagaaaaagaacactgagaccaaaaaatgatagaaag
agatcttatgcttccaagatacaacttgatattgagagtgatgatggagagatgtcttct
gaagaggatgtttatgttgtgagttcaagtgatgaatcggaagaagaatgtacaagtaga
aaaagaggaaaaaatgtgaagaaaaatgtcagtactataaagaaatctgtggaatgtaca
gatagcaagaagagtccaagaacaaaaactgtgaaacgaagctctacagacactagtttg
attgaagcaaattcagatagtgattttgaaccagagattatcaacttagcaagtggacct
aggaatacgtcaccaaaggctacctctaattctaagtcaaaagattcacaaagaattaag
acaggtcgtgatcaatgggtagaagtctattctctagacagtaatgaatggatttgtata
gattgtgtcacgtcaactattgctcaaccagatgcatgtgaaaaaatggcaacacaccca
ttgtcttatgtccttgcttttgacaatgataaccatgtgaaagatgttacaagtcgctat
gcgtccaagtggatgtcacataccagaaaacagagagtggatgaggaatggtggcagcaa
acattgactccatatcagttaaaagataaagacaagagtgaaaaagaagacttggcctta
caagtgcaattacagcaacagccgatgccaacaagtgttgctgagtacaagaatcatccc
ttatatgccctgaagagacatttgttgaagtttgaaggattttatcctgaaaatccaaaa
gtgttgggattctgtagaggagagccagtctatgccagagaatgtgttcatacgttacat
accagagagacatggttgaaagaaggacgtgtagtaagagtgggtgaaaagccttataag
ctggtgaaagctcggcccaaaccaaaaaagaaataccaagacacagtgaagaatgaggaa
ccaacagttcctgtctttggacgatggcaaactgaagaatacgaaccaccactagcggtt
gatggcaaagtgccaagaaatgaacatggtaatgtggagttatttctgccgagaatgttg
cctaaaggaacagttcatttacaaattcctggtttgaatcgtgttgccagaaagttaaat
atagattgtgcacaagcaatgattggatgggatttccatggcggatactgccacccatta
tttgatggttttgttgtatgtgaagaacatcaagagatgttactggatgcctggcaacaa
gatcagcaggaaacagaaagaaaagaacgtgagaaaaaagagaagagagtactgaaacac
tggaagctattaattaaaggattactaattagagaaaggctgaagaaacgatttcagaca
gaggataacttggtgctgccatcaacatcgagtaatgtcaaagaatcagctgctccagat
ttacagatgtcatggcctctcaataaacaactgccaaaaactgatcaaaataatttattt
ccatttgagaaactctaa
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