Saccoglossus kowalevskii (acorn worm): 102804485 Help Entry 102804485         CDS       T04123                                  Name (RefSeq) DNA-binding protein SMUBP-2-like   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism sko  Saccoglossus kowalevskii (acorn worm) Brite KEGG Orthology (KO) [BR:sko00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:sko03009]     102804485    03012 Translation factors [BR:sko03012]     102804485 Enzymes [BR:sko01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      102804485     5.6.2.5  RNA 5'-3' helicase      102804485 Ribosome biogenesis [BR:sko03009]  Eukaryotic type   Other ribosome biogenesis factors    102804485 Translation factors [BR:sko03012]  Eukaryotic type   Initiation factors    Initiation associated factors     102804485 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_30 AAA_19 nSTAND3 DEAD ResIII UvrD-helicase Viral_helicase1 AAA_22 AAA_16 Flavi_DEAD Helicase_RecD PhoH AAA cobW AAA_10 ABC_tran SLFN-g3_helicase ATPase_2 DnaB_C AAA_6 NPHP3_N ATPase AAA_25 Zot AAA_7 RuvB_N AAA_33 Motif Other DBs NCBI-GeneID:  102804485 NCBI-ProteinID:  XP_006819799 LinkDB All DBs Position Un AA seq 520 aa AA seqDB search MRQDCLVSVHGVTKPYNAPQTKRRWSSGTTILPGRSTRGSKLPLIPLGTLSIKQRSGLTT SYFVRAVAVNLPASLLTKLQQVYQHLSKQNESKNCGNTCDRFDKQCIRVFLKTKMNVNKF TSKTGNLLEVERDAEISESRVLEDLDKCSSGPSYHLVNVLFGVIPISSPNIHLDYGDSTL PAKDIQCINTQLDESQRESVRFALQQREVAVIHGPPGTGKTTTVVEIILQAVKLKMKVLA CAPSNVAVDNLVERLGKQVKIVRLGHPARQLQHTHKYSLDAILSRSDGAKIVQDIRKDID KSLSKCKKTRERGEKEGLKREVRDLKKELRQREAAAIKDVLITADVVLTTNISASLDGPL KQLKADHFSLAVIDECAQALEASCWIPLLQVPRCVLAGDHQQLPPTVISNQASKDGLSVS LMERIIDLYGDGVVRMLTIQYRMNADIMKWSSQRLYDDKLQAHESVASHLLKDLPNIEET KDTCTALVLIDTTGCDLHELQIPDEMSKGNEGNKYIQNKS NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atgagacaagactgtttggtgtctgtgcatggtgttacaaaaccatataatgcaccacaa acgaaaaggaggtggagttcaggtaccaccatactaccagggagatcaacccgaggttca aagcttccacttatccccctggggaccctgtcgattaaacaacggtctggtctgacaact tcatactttgtcagagcagtcgctgtaaatttacctgcaagtttgttaactaaactacag caagtgtatcaacatttatctaaacaaaatgaatcaaagaattgtggtaacacttgtgat agatttgataaacagtgtatcagagtgtttttaaaaactaaaatgaatgtcaataaattc acaagcaaaacaggcaatcttttagaagttgaaagagatgctgaaataagtgagagcaga gttcttgaagatcttgacaagtgtagttctggtccatcttatcatctggttaatgtattg tttggtgtgataccgataagctctccaaacattcatctagactatggagattcgactctg ccagcaaaagatatacagtgtataaatacacaactcgatgaatctcagcgagaatctgtc cggtttgctctacagcaacgagaagtggcagtcatacatggaccacctggtactggtaaa acaacgactgttgtggagatcattttacaagcggttaaactgaaaatgaaggttttagcg tgtgcaccatccaacgtagctgtggataacttggtggagagattaggaaaacaagtgaaa attgttagacttggtcaccctgctagacagttacaacacactcacaaatactctctggat gctatattatcacgaagtgacggggcaaagattgtacaagatataaggaaagatatcgac aaatcactgtcaaaatgtaagaaaacaagagaaaggggagagaaagaaggcctgaaaaga gaagtcagggatctgaagaaggaattacgacagcgtgaggctgctgctattaaagatgtc ctgataacagctgatgttgtcttgacaaccaatattagtgcatcacttgatggaccattg aaacaattaaaagcagatcacttcagtcttgctgtaatagatgaatgtgcacaggcatta gaagccagctgttggattccattattacaagtaccaagatgtgtgttagccggggatcat caacagttaccacctacagttatatccaatcaagcttctaaggatggattatctgtgagt ttgatggagagaattattgacttatacggagatggtgtggtaagaatgttaacaatacag tacaggatgaatgcagatatcatgaaatggtcatctcaacgtctctatgatgataagttg caagcccatgagtctgtggcttctcatctattgaaagatctgcccaacatagaggaaaca aaagatacatgtacggcattagtgttaattgatacaactggatgtgatctccatgaatta caaataccagatgagatgtcaaaagggaatgaaggtaacaaatatattcagaataaatca tga

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