Saccoglossus kowalevskii (acorn worm): 102804683
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Entry
102804683 CDS
T04123
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03030
DNA replication
sko03410
Base excision repair
sko03420
Nucleotide excision repair
sko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102804683
03410 Base excision repair
102804683
03420 Nucleotide excision repair
102804683
03430 Mismatch repair
102804683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sko03032
]
102804683
03400 DNA repair and recombination proteins [BR:
sko03400
]
102804683
DNA replication proteins [BR:
sko03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102804683
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102804683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
Rad17
AAA_14
AAA_18
AAA_30
RuvB_N
AAA_17
nSTAND3
BRCT_2
AAA_7
AAA_33
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
102804683
NCBI-ProteinID:
XP_006812503
LinkDB
All DBs
Position
Un
AA seq
785 aa
AA seq
DB search
MKTLDQLDEDEEDSKEPVPWRTSPRKSVRSEITPQKIKKEKTGLASKLANKARNVKVLVE
DTPTKSPRKPTPRKLDENGSKSKVTVIKETPQKTPTKSQAKTVTPKKTTPATGGDTEDGT
PQGSKQKGMYRAYLNREGPKSLGSKEIPEGADNCMEGLTVVITGVLESLERDQAKELVER
YGGKVTSSVSKKTSYMVVGRDAGESKLNKANQFKTKQIDEDGLLNLIKTLPGKISKYDPT
NQMGKVKETPKRKSTDTPARESLPSTSRAESPLVKKTSSPLKTSSTDQSPHSLLWVDKHK
PTNLKQIIGQQGDKSNVKKLFNWLKKWHQIHVGNKKPGYMNKDDGSGFKAXLLSGPPGVG
KTTSSQLVCQEAGFSYIELNASDTRSKRSLKEVVAQSLNNQTVVDFLGGTSEQTKGHKHC
ILMDEVDGMAGNEDRGGMQVIHNLNMWSASEKSMSYDQVKRDSEKAQKDMKMGPFDVVRK
VFCFGEERKHMSFFDKTDLFFQDYSIGPLFVQENYPSVMPVNARGDIKKHLQLLSQAADS
ICDGDLVDKKIRTQQSWSLLPTQAVFASVIPGEIMQGNLSFMVNFPSWLGKHSSTGKNNR
LLQALQLHMRLRASGSKYEINQQYVPHLRNFLTKPLIQNEQDGVRDVIDLLDSYDLQRED
FESILEVGQFAGRKDPMSLVNSKVKAAFTRTYNKESHMVPYSMVVAAKKKRGADTGLEDD
LPIDGEGATQPDASDVESDEDITHDAMIKTKKPGSKAAKSTAANKKPTDGKGKGKGKGKG
RGKGK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattagatcaactggatgaggacgaagaagacagtaaagaacctgtaccatgg
aggacatcacctagaaaatctgtgcgttcggaaataactcctcagaaaatcaaaaaagaa
aagaccgggttggccagtaaactcgcaaacaaggcaaggaatgtcaaagtgcttgtggaa
gacacaccgactaaatcaccacggaaaccaactccaaggaaacttgatgaaaatggtagc
aaatctaaagtaacagttatcaaggaaactccacagaagacaccgaccaagtcccaagcg
aaaactgtaactcctaaaaaaacaactcctgccacaggtggtgatactgaggatggaaca
ccacagggatccaagcaaaagggaatgtacagggcttatttaaacagagaaggaccaaag
tctttagggtcgaaagaaattcctgagggagctgacaattgtatggaggggttgacagtg
gtaattactggggtgctggaatcccttgaacgagaccaggcaaaggaattggttgaaagg
tatggtggtaaagtgacgagtagtgtcagcaagaaaaccagttatatggttgttggtagg
gatgcaggggaaagtaaacttaataaggctaatcagtttaaaacaaaacaaattgatgaa
gatggtttattaaatttaattaaaacattgccaggaaaaatctccaaatatgatcctaca
aaccagatgggcaaggtaaaagagacacccaaaagaaaaagcacagacacaccagcaaga
gaatcattgccttcaacttcaagagctgaaagcccattggttaagaagaccagttcacct
ttaaaaactagtagtactgaccaatcaccacatagcttgctgtgggtggacaaacataaa
ccaacaaaccttaaacaaattattggtcaacaaggtgataaaagtaatgttaagaaatta
tttaattggttgaagaaatggcatcaaatacatgttggaaataaaaagcctggttacatg
aataaagatgatggatctggtttcaaagctngcttattgtcaggaccacctggtgttggt
aaaaccaccagttcacaattagtatgtcaggaagctgggttttcatacattgaactgaat
gccagtgatactcgaagcaagagaagcttgaaggaggttgttgcccagtcattgaataat
caaacagtggttgattttcttggaggcaccagtgaacagaccaaagggcataaacattgt
attttaatggatgaagttgatggaatggcaggtaatgaagacagaggaggtatgcaggtt
attcataatttgaatatgtggagtgcaagtgaaaagtccatgagttatgaccaagttaaa
agggattcagaaaaagcacagaaagacatgaaaatgggaccatttgacgttgttcgaaag
gttttctgttttggagaagagagaaagcacatgagtttctttgataaaactgatttgttc
tttcaagactattccattggtcctttatttgttcaagaaaattatccttcagttatgcca
gtgaatgcaaggggagatataaagaaacatttacagttgctaagtcaagcagcagatagc
atttgtgatggagatctggttgataaaaaaatacgaacacagcagagttggagtcttcta
ccaacacaggctgtttttgcaagtgtgattcctggtgagataatgcaaggcaatctctca
ttcatggtgaactttccgagctggttgggaaagcattccagtacagggaaaaataatagg
cttttgcaagcactacagttgcacatgagactcagggcatctggcagcaaatatgaaatc
aaccaacagtatgtgcctcatcttaggaatttcctgacaaaacctctgatacaaaatgaa
caggatggcgtgagagacgtgattgatttactggacagttacgatcttcagagagaagat
tttgagagtattttagaagtaggacaatttgcaggaagaaaagacccaatgagtttagtc
aattctaaagttaaagcagcatttacacggacttacaacaaagaaagtcacatggtacca
tactcgatggttgtagcagctaagaagaaacgcggtgctgatactgggctggaagatgac
ttgccaatagatggtgagggtgctacccaacctgatgcaagtgatgtggaaagtgatgaa
gatattacccatgatgcaatgattaagaccaaaaagccaggttctaaagctgctaaaagt
actgcagctaataagaaacccactgatggcaaaggtaaaggcaaggggaaaggaaaaggc
cgtggtaaaggaaaatag
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