Saccoglossus kowalevskii (acorn worm): 102804948
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Entry
102804948 CDS
T04123
Name
(RefSeq) putative ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
102804948
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102804948
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
Helicases
102804948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
WHD_HA2
AAA_19
ATPase
ResIII
nSTAND3
AAA_30
Flavi_DEAD
NAT10_TcmA_helicase
nSTAND_NTPase5
FtsK_SpoIIIE
SRP54
ABC_tran
2CompARG
Motif
Other DBs
NCBI-GeneID:
102804948
NCBI-ProteinID:
XP_077869785
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MGKVKRKFNWKARRVAAENTPNEPVDVPEVELDQTLHGTFDTSNALVLPAKKDKSEKKFD
EIKKVRKLSKKKRKQLEKVIEHRKKKEKRAELLAALQEVQASKDEMLMFQSTAKIGQHVK
APKRQLETCDLKISSISGSNKKKRTEDDSVCRYGSDSSDINTSDMSTDDEETPDKEEVII
KEKENAKQVEVDDNVKDAESDKSELKKQESVVKDCENTEKKDFLSDGKVKVKNIVEISEE
DRKPAVFVPVNRSSEIQEARLGLPILAEEQIIMETVRHNSVVIICGETGSGKTTQVPQFL
YEAGYAQNGLIAVTEPRRVAAISMSKRVAHEMNLSTSEVSYQIRYEGNVSKETQIKFMTD
GVLLKEIQKDFLLSSYSVVIIDEAHERSVYTDILIGLLSRIVPLRKKRAKPLKLIIMSAT
LRVEDFTENGKLFKVKPPVLKVDSRQYPVTVHFNKRTPMDDYMNEAYQKILKIHRTLPAG
SILVFVTGQNEVNALCRKLKEATRPKQFKAHLQDEDAEDDEQEAKDFKKRKLPKIQLDSY
SVDPYEEEEIDEVNDDLLEDIQSDFGLQTEVDSSEDEMDKSAIMSSENDDVPLHVLPLYS
LLSPEKQARVFQPPPEGTRLCVVSTNVSETSLTIPGIKYVVDTGKVKRRYYDKVTGVSAF
RITWTSKASANQRAGRAGRTEAGHCYRLYSSAVFANDFDKFSPPEITRRPVDDLILQMKD
MNIDKVVNFPFPTPPEIETMKAAEKLLVSLGALEPPLKTGRFRDLKKAECSSHITPLGKA
MACFPVAPRYAKMLALGAQEDCLQYVIAMVAALTVHDVFDENINSSDSSSEKEVNRKVKA
RVSHYKRLWAGQGESLLLGDLMVLLSAVGASEFGGLTPAFCGSHCLRYKAMIEIRRXXXX
XSFSVNAVNPDCGIFVDPKMQPPSLIQMKILREIGLAGMGDHVARRLPSDQQTLETKGAY
KAEGLEDLIYIHPESVLFRQLPEYVIYQEVIETGKLYMRGITAIEPDWLPRLLPHMCVLS
RPLEEPPVVYHAKTGTVHCYMTSTFGRGGWTIPAVELEYPNNIEKYKWFAKFLLEGKVIK
SLAVFVPHLLSTPSTMVKSWAKLQPRTEVLLKSLVMEDVNSKDALLKAWDKNSQYLLSSF
CEWLPNEKHIEVQKIWPPVKRKEN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggttaagcgcaagtttaactggaaagctcgacgtgtcgctgcagaaaacacg
ccgaatgaacccgtagatgttcctgaggttgaacttgatcagactttgcacggtactttt
gacactagcaatgctttagttttgccagccaagaaggacaaatcggagaaaaaattcgac
gaaataaagaaagttagaaaattgagtaaaaagaaaaggaagcaactagaaaaggttatt
gagcacagaaagaaaaaagagaagagagcagaattgttggctgctttacaagaagtacag
gcttcaaaagatgaaatgttgatgtttcaatcaacagcaaaaattggtcaacatgtgaaa
gcccctaagagacaacttgagacgtgtgatttaaaaatcagcagtattagtggaagcaat
aaaaagaaacgaacagaagatgacagcgtctgtcggtatggctctgattcaagtgacatc
aacacgagtgatatgtcaactgatgacgaagagacgccagataaagaagaagttattatc
aaggagaaagagaatgctaaacaagttgaggtagatgataatgtgaaagatgctgaaagt
gataaaagtgagctcaagaaacaggaatctgttgtgaaagactgtgaaaacactgagaaa
aaagatttcctgtcggatggaaaagtgaaagtaaagaacattgttgaaataagtgaagaa
gataggaaaccagctgtgtttgttcctgtgaatagaagttcagaaattcaggaagccaga
ttggggttaccaatattagcagaagagcagatcatcatggaaaccgtcagacataattct
gttgttataatatgcggtgaaacgggtagcggtaaaacgacgcaagtaccacagttttta
tatgaagctggatacgcacaaaacggattgattgcagtgacagagccacgccgtgttgcc
gcgataagtatgtcaaaacgtgttgcacatgaaatgaatttgtcaaccagtgaggtttcc
taccaaatacgttacgaaggtaatgtatcgaaagaaactcaaattaaattcatgactgat
ggcgttctactcaaagaaatacagaaggattttcttctctccagttactcggtcgtgatc
atagatgaggcacacgaaaggagtgtttatacagacattctgattggtttactttcaaga
atagttcctctcagaaaaaagagagcaaaacctttgaagttgataatcatgtcagccacc
ctgcgagtggaagacttcacagagaatggcaagctatttaaagtgaaaccaccggtgttg
aaagtggattccagacaataccccgtcactgtacacttcaacaaaagaacaccaatggat
gactatatgaatgaagcatatcaaaagattttaaaaattcatcggactttacctgccggt
agtatattggtttttgttactggacaaaatgaggtcaatgccctctgtagaaagcttaaa
gaagcgacaagaccaaaacagttcaaggctcatttgcaggacgaggatgctgaagatgat
gaacaagaagctaaagatttcaaaaaacggaaattacccaaaatacaactggatagctat
tctgtggatccttatgaagaagaagaaatagatgaagtaaacgatgaccttttggaagat
atccaatcagactttggtttacaaactgaagtggattcatccgaggatgaaatggacaaa
agtgctataatgtcgtctgaaaatgatgatgtcccgttacatgttttaccgctatactcg
ctattgtccccagaaaagcaagcaagggtatttcaaccgccacccgaaggaacacgtctg
tgtgtcgtgtccaccaatgtttccgagacttcactgacaatacccggcattaagtacgtg
gtggataccggcaaggtcaagagaaggtactacgataaagtgacaggtgtgtccgctttt
aggatcacctggacgtcgaaggcatcggccaatcaaagagcgggacgtgctggtcgtact
gaagctggtcactgctacagactctattcctcagctgtatttgccaatgattttgataaa
ttctcaccgccagagatcactagacgacctgtagatgacctgatattacagatgaaggat
atgaatattgataaagttgtaaacttcccatttccaactcctcctgaaattgaaactatg
aaggctgctgaaaagttacttgtatccctgggtgcattagaaccaccactgaagacagga
agatttagagatttaaagaaagctgaatgttccagccatattacaccccttggtaaagcc
atggcatgttttcctgtggcgccacgatatgctaaaatgttagcactgggtgcacaagaa
gactgcttacagtatgtcatcgccatggttgcagcactcactgtacatgatgtatttgat
gaaaatatcaactcatcagactcatcaagtgagaaagaagtgaatcggaaggtgaaagcc
agagtatcacattataaacgactatgggctggacagggtgaatctctcttactcggtgat
ctgatggtgttgttaagtgcagttggtgccagtgaatttggtggattaacaccagcattc
tgcggttcacattgtctgcggtacaaagccatgatagaaataagacgnnnnnnnnnnnnn
ncttcattttcagtaaatgctgtcaatccagactgtggaatatttgtggaccccaaaatg
caaccaccgtcattaattcagatgaaaattttacgggaaattggattggctggtatgggt
gaccacgtagcaaggaggctgccctctgatcaacaaacactggaaactaaaggagcgtac
aaggctgaaggtctagaagatttgatttatatccatccagagtctgttctgttcagacag
ttgccagagtatgtcatctatcaagaagtgatagaaacaggcaaactatatatgagaggt
ataacagcaattgagcctgattggttgccaaggttactgcctcacatgtgtgttttatcc
agaccattggaggagcctcctgtggtgtatcatgccaagactggtactgtacattgttat
atgactagcacattcggtcgtggtgggtggactattcctgctgtggaattagaatatcca
aataatattgagaaatacaaatggtttgctaagtttctacttgaaggaaaggtcatcaag
tctctggctgtatttgtaccacatctgttgtccactccaagtacaatggtcaaatcttgg
gcaaagttgcagccgaggacagaagtgttgttaaaatccttagtgatggaagatgtgaat
tcaaaggatgccctattaaaagcctgggacaaaaatagtcaatatttactttcttctttt
tgtgaatggctgccgaatgaaaaacatattgaagttcagaaaatatggccacctgtcaaa
agaaaggaaaactga
DBGET
integrated database retrieval system
