Saccoglossus kowalevskii (acorn worm): 102806476
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Entry
102806476 CDS
T04123
Name
(RefSeq) protocadherin Fat 4-like
KO
K16507
protocadherin-16/23
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sko04515
]
102806476
Cell adhesion molecules [BR:
sko04515
]
Cadherins
Cadherin related
102806476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
SEA
Cadherin_CELSR2_9th
EGF
EGF_TEN
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
102806476
NCBI-ProteinID:
XP_006825721
LinkDB
All DBs
Position
Un
AA seq
1802 aa
AA seq
DB search
MPTELPTTEGETETYTQQYTASEMPTELPTTEGETETYTQQYTASEMPTELPTTEGETET
YTQQYTASEMPTELPTTEVETETYTQQYTATGSTIELSSTEIETETYAQQYTATGSTIEL
SSTEVETETYTQQYTATESTIELSSTEVETETYTQQYTATESTIELSSTEVETETYTQQY
TATEKTKTAVLKFEITNALYTEEYANRISAEFQSLEDTVVEEISNKVENVPGFRRVEIVT
FGFPGDYIFGVPGNREPDNSEAKEVVTTVKLVVTNAEFVEDLNNRQSESFKTLSTSLTAE
VARLLQHTPDFIRAEIVEFRRGSVIVVMNLVFAENTTDALQELSTQNLISNLEADGLGNY
TVGNITVIQDQCIGNPCFNNGYCVSADYGYLCYCLEGYKGLQCEQEYSEHIILKSGCETL
DFNEESVIMQPFFDLSTTVINPEVISSYEITGDNYGVFFINETSGELTTSITHFDRETRE
EYELRCKLVMSGTESLNFDLKIIIIDINDNEPRFQNTPYENILMEYSPFGTLVAVVIATD
DDSSDILSYSFDINYSVYLQNMFSIDSRSGEVTTQGLVSRDYFRKYGLLDGNDILLPVTV
SDGMFSGRTNILVQIEPLFVKGTNGTETVFREVLVREDVNIGTLVANVGLPDPEDPETQY
SYRMSEAGSGNSSFLINETTINVEITIEDINDNDPVFAENAYTSSVREDTNGPNTQNDPV
VVIPPIVAKDDDAGSNADIRYFLSGDGSELFKIDPKTAVITKNALTDLDYEITQMYTLTV
TAKDMDGNAGFRMDNVYLNVMVLDMNDNIPVFVENDTSISVSENIAVGTVIGYVNATDAD
DGQNGEIYYFIQTGSEGKFRLNPDSGELSILSELDREIKEVYELLVVARDKGYPANEASV
TVTITLLDVNDNSPVFNERLYVASISENEPIDSYVLDLNATDPDKDDFGLVFYSLEETID
FAIDLDSGILTTNTSFDREKKSVYNIHVLAADGGIPGRTSSVSVHISILDVNDNEPKFDS
DQYTATILKTPTGNINDGTIVTVVSANDADDGVNAQITYSIEDENYNDLFNVDDKGVVTV
AVGGGVASDEIQFNISATDGGSSTKRATTTVFVKLEAPSTTLIFNETIYRFAVNENEYDI
TIGKVEAFNPDDTLITYVMPFAIGGIHVNSTTGELTIDAPFDRESKPVVIFNIIAQGDGN
FAFTTIEVTFIDVNDEKPVFIFPPNSPFYFDSGFQENAIIPVLLKVVTLDADEGVNADRV
YTLVDGDDDKIESVIAVTDSGVPPLNATTTIVIPVTDENDNAPTISAAQTSLTVQEHTPN
GTEVAYVMAEDKDIGDNAMVTFTLEGDGGMFTIDETSGSIQISNDLDREQVDRYTLTVVA
TNGGTIAKSSEPLTFSVLIGDINDNKPEFLTDLSYPVVLPKDTAVGSMVLQVQAIDMDLG
SNGYITYDLIGGGNCSQDMFTMNSTNGNIETSRLLYSEVQGICVIDIRAMDGGVYPLSSI
ISIEIDIIEVNHPPIFHFDMYNGIVSEAANIGTIVTMNPRRVKAEEKSDQGPNAEIVYEI
LDGGDGLFEIDPVDGDIKVASKLDRESVEMVVIIIVAHDLTPDPKSATTNVTITMTDVND
NPPMLPREASIILPQTTDPGYVVAQIKANDSDTGVNTESYYSFANAQINGIGKVDPNDYF
DIDDDGNVTTKELLYDANRTSTLTIDLVVVARNKQSLVSTGNQRELASTWITIVFIYEYT
PSCAKDEYSVLISENATIGDYLDVFLGPENNSSRPLPELVYTITGSVRMSIYSLLSLSIL
VQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagaattacctaccactgaaggtgaaacagagacatatacacaacaatatact
gcatcagaaatgccaacagaattacctaccactgaaggtgaaacagagacatatacacaa
caatatacagcatcagaaatgccaacagaattacctaccactgaaggtgaaacagagaca
tatacacaacaatatactgcatcagaaatgccaacagaattacctaccactgaagttgaa
acagagacatatacacaacaatatacagcaacaggaagcacaatagaattatcgagcact
gaaattgaaacagagacatatgcacaacagtatacagcaacaggaagcacaatagaattg
tcgagcactgaagttgaaacagagacatatacacaacagtatacagcaacagaaagcaca
atagaattatcgagcactgaagttgaaacagagacatatacacaacagtatacagcaaca
gaaagcacaatagaattgtcgagcactgaagttgaaacagagacatatacacaacagtat
acagcaacagaaaagacaaaaactgctgtgttaaaatttgaaataacaaatgctctgtat
acggaggaatatgctaatcggatttctgctgaatttcaaagtttagaggacactgttgtt
gaagagatttcaaacaaagtagaaaacgttcctggtttcagacgtgtggaaattgtaaca
ttcggtttcccaggtgactacatttttggagtaccaggaaatagagaacctgataactct
gaagcgaaagaagtggtaacaaccgttaaactcgttgtcaccaatgctgagtttgtggaa
gacctgaataatcgccagtcagagtcatttaaaacattgtccacatcattaactgccgag
gtagctcgtcttttacaacatacaccagacttcatccgtgcagaaattgtggagttcaga
cggggttctgtcatagttgtcatgaatcttgtatttgctgaaaacaccacggatgcatta
caggaactatcaacgcagaatctcatcagtaatctcgaagcagatggtctaggaaactat
acagttggaaacataaccgtcatacaagatcaatgtattggtaatccatgtttcaacaac
ggatactgtgtgtctgcagattatggatatctatgctactgtctagaaggatataaaggt
cttcagtgtgagcaagaatacagcgaacatattattctaaagagtggatgtgaaactctg
gacttcaatgaagagagtgtaataatgcaaccgttttttgacttatcaacaaccgtcatc
aatcccgaagtaataagttcctatgaaataactggagacaactacggcgtgtttttcata
aacgagacatccggcgagttaactacttctattacacactttgatagagaaacacgagaa
gaatacgagctgcgttgtaaactggtcatgagcgggacagagtcgctgaactttgatttg
aaaataataatcatcgacatcaacgacaatgaaccacgttttcagaacactccatatgag
aatatactaatggaatattcaccttttggaactcttgtcgcagtagttatcgcaactgac
gatgacagtagtgacatactctcgtactcgtttgatatcaattatagcgtttatttacag
aatatgttttccattgattcgagaagtggtgaagtaaccactcaaggtttagtcagcagg
gattattttcgtaaatatggcttactggacggaaatgacattttgctgccggtaacagtc
agcgatggcatgttttctggtcgaaccaacatcttagtacaaatcgaaccgctatttgtc
aaaggcacaaacggaaccgagacagtctttcgtgaggtactagtaagagaagatgtaaat
atcgggacactagttgcaaatgttggattgcctgatcccgaggacccggaaacacagtat
agttaccgaatgagtgaagcaggcagtgggaattctagtttcctgataaacgaaacaacg
attaacgttgagattacaatagaagacataaatgacaatgatcctgtatttgccgagaat
gcatacacatcgtctgtacgggaagatactaatgggcccaatactcagaatgatccggtt
gttgtcataccaccaattgttgctaaggacgacgatgcaggatcaaatgctgatattcgg
tatttcttatcgggagatggcagtgaacttttcaagattgatcccaagacagcagtaata
acgaagaatgctttaacagatctagactatgaaataactcaaatgtataccttgacagtg
accgctaaagacatggacggtaacgctggttttagaatggacaatgtgtatttaaatgta
atggtcttggacatgaatgacaatatacctgttttcgttgaaaatgacacatcaatttca
gttagtgaaaacattgctgtaggtacggtgattgggtatgtaaacgctacggacgcagat
gacgggcagaatggtgagatatattatttcattcagacgggaagtgaagggaaattcaga
ctgaacccagactctggagaactatcgattctatctgaacttgacagagaaattaaggaa
gtatatgaactgcttgtcgttgcaagggacaagggctacccggcaaacgaagcaagtgtc
accgttacaattaccttgcttgatgttaatgataattctcccgtcttcaacgagcgactt
tacgttgcgagcatctccgaaaatgagccaattgatagctacgtgcttgacttaaacgca
actgacccagacaaggacgacttcggtttggtgttttattctttagaagaaacaattgac
tttgccattgatctagatagtggtattttaactactaacaccagctttgatcgagagaaa
aagtctgtatacaatattcacgtattagcagctgatggtggaattcccggtcgaacgtct
tccgtatctgttcacatttctatattggacgtgaatgataacgaaccgaaattcgattcc
gatcagtacaccgcgacaatattgaaaacacctacaggaaatatcaacgatgggacaatt
gtgactgtagtgtctgcaaatgatgccgatgatggtgtcaatgctcagatcacatacagt
atcgaggatgaaaactataacgacctatttaacgttgatgacaaaggtgttgtaactgta
gcagttggtggtggtgtagctagtgacgaaattcagtttaacatatcagctactgacggc
ggctcgtcgacaaagcgtgcaacgacaaccgtattcgtaaaactagaagcgccttcaaca
acattaatattcaatgaaacaatttacagattcgccgttaatgaaaatgagtacgatatc
actattggcaaagtcgaagcgtttaacccggatgatacattgataacctatgtaatgccc
tttgcgattggcggtattcatgtgaactcaacgacaggtgaactaaccattgatgcacca
tttgacagggaatcaaagccagtcgtcatcttcaatattattgcacaaggcgatgggaat
tttgcatttacaacgatcgaggtcacatttattgatgtaaatgacgagaagccagtgttc
atctttccgccaaactctccattctactttgattctggtttccaagaaaacgccatcatt
cctgtgttattgaaggttgttacgctagacgctgatgagggagttaatgccgatcgcgtg
tacactcttgttgacggtgacgatgataagatagaaagtgtcattgctgtgacggacagt
ggtgtacctccacttaatgctacgactactatcgtcattcctgttaccgacgagaacgac
aatgcaccgactatttctgctgcccagacatcactcactgtacaagaacacacacctaat
ggaacagaagtggcgtatgttatggcggaagacaaagacataggtgacaatgccatggtg
acatttacgttagagggcgatggtggaatgtttacaattgacgaaacgtcaggatcaatt
cagatatcaaacgaccttgaccgtgaacaagttgatcggtatacccttactgttgttgca
acaaacggaggaacaatcgctaagtcatcggagccattaacatttagcgttctcattggg
gacattaacgacaataagccagagttcttgaccgatctgtcatatccagtcgtgctaccg
aaggatacggcagtcggtagtatggtgctgcaagtacaggctattgatatggatttgggg
agcaacggttacataacgtacgatctaataggtggcggtaattgtagtcaggatatgttt
actatgaattcaacaaatggaaatattgaaacttcgcgtctattatacagcgaggtacaa
ggtatttgcgtcattgacatccgtgccatggacggtggtgtatatccattaagcagcatt
atatcgattgaaatagacattattgaggtcaatcacccacccatatttcactttgatatg
tataatggaatcgtgtctgaggcagcaaacattggtaccattgtaaccatgaatccaagg
agagttaaggcagaggagaaatcggaccagggtccaaatgctgaaatagtttatgagata
ctggatggaggcgacggtttgtttgaaatcgatccagtggatggagatatcaaagttgcg
agtaaacttgatagagaatctgttgaaatggtagtgattataatcgtcgcacatgacctt
acacctgaccccaaatccgctactactaatgtaacaatcactatgacagacgtcaatgac
aatcccccaatgcttccacgagaggccagtatcattctaccgcagacgactgatccaggc
tacgttgtggcacagatcaaagccaatgactctgatacaggagtgaacactgagagttat
tattctttcgcaaacgcacaaataaatggtattggtaaggttgatccaaatgattatttt
gatatcgacgatgatggaaatgttacaacaaaggagttactgtacgatgcgaatagaaca
tctactcttactattgacttggttgtagtggcccggaataaacaaagtttagtatcgaca
ggaaatcaaagggagttagcatcaacctggataacaatcgtgttcatttatgaatataca
ccttcttgtgctaaagatgaatacagcgtacttataagtgagaacgcaacaataggtgat
tatttggacgtgttcctcggcccagagaacaatagttcaagaccattaccagaactcgta
tatacgattactggcagtgtacggatgagtatatattcattgttaagtttgtcaatactt
gtgcagtga
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integrated database retrieval system