Saccoglossus kowalevskii (acorn worm): 102809725
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Entry
102809725 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10-like
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
102809725
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102809725
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
Helicases
102809725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
CTE_SPB4
DEAD
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102809725
NCBI-ProteinID:
XP_006818910
LinkDB
All DBs
Position
Un
AA seq
607 aa
AA seq
DB search
LVLDEADRILDLGFEKTMNAIIENLPPERQTLLFSATQTKSVRDLARLSLKDPKYISVHQ
HHEYSTPAQLEQSYVVCELHQKLNMLYSFIRNHLKKKTLVFMASCKQVKYVYEAICRLRP
GITVMALYGKLNQLRRVAVYNEFCKKENAVLIATDIAARGLDFPAVHWVLQLDCPEDAST
YIHRAGRTARYQDDGESLLVLLPSEEKNMLHQLVERKIPIQKIRINPDKLIQIQNKLQAI
CAKNYEMKQSAQRCFISYLRSIYLMKNKDVFDINKLTTDEYATSLGLVISPRIRFLQRAE
KLREKQMAEKISSTKTETKITPQTSSGGSEEDESENEDSNSNHGDKNKLIADKDIKISLD
DSDDDILTVKTKNVFEEDSQSSEEDTEEDTVEVREETVTVSVKPEEENEKKDLKVPVKTN
PKKKLSKAALAKKLARKKYKVNQKIIFDEEGEVAQQFPPVQKTFIQMDEDDDKGGINIDK
TVVLMREEDKHDKQVFRQRVKDKHRAEKLKKKAGRKRRKRGDESEEEDIGVQLSINPEDE
CNIDLLPDPDQYFNKSEKHSHAEKEFSFSNTKKKRKKQADVKKKMLIDDMGLKEEEELAL
HLLMKDS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttagttctagatgaagccgatcgaattcttgatttaggatttgagaaaactatgaatgca
atcatagagaatttgccaccagaaagacagactctgctgttttcagcaacgcaaacaaaa
tcagtgcgtgatttagccaggttaagtcttaaagatcctaagtatatatctgtacatcag
caccatgaatatagtacaccggcacagttagaacagagctatgtagtttgtgaactccat
cagaagctgaacatgttatattcttttatacggaaccatctaaaaaagaaaaccttggta
tttatggcaagttgcaaacaggtaaagtatgtatatgaagcaatatgtcgtctacgtcct
ggtataacagtgatggcattgtatggaaaactaaaccagttacgaagggtcgccgtctat
aatgaattttgtaaaaaggaaaatgcggttttaatagctacagacattgctgcaagagga
ctagattttcctgctgtgcattgggtcttacagttagactgtccagaggatgccagtact
tacatacacagagcgggtagaacagctagataccaagatgatggggaatcattgctagtt
ttactcccatcagaagaaaaaaacatgttacaccaattggtagagaggaaaatacccata
cagaaaataaggataaatccagataaattgatccagatacaaaacaaactgcaggcaata
tgtgctaaaaactatgaaatgaaacaatctgcccagagatgttttatttcttacttgaga
tctatttatttaatgaagaataaagatgtctttgatatcaataaattaacaactgatgag
tatgcaacgtccctgggtcttgttatttcaccaagaatcagatttttgcaaagagctgaa
aaattgagagaaaagcagatggcagaaaaaatatcatccacaaaaactgaaacaaaaatc
acaccacaaacaagcagtggtggatcagaggaggatgaaagtgaaaatgaagacagtaat
agtaaccatggtgataaaaataaactaatagctgataaagatattaagatttctcttgat
gatagtgatgatgatattcttacggtgaaaactaagaatgtgtttgaagaagattcccag
tctagcgaagaagacactgaagaagatactgtagaagtcagagaggaaacagttactgtg
tcagtgaaaccagaagaagaaaatgaaaagaaagatttaaaagttccggtgaagacaaat
cctaaaaagaaattatcaaaagcagcattggccaagaaactagctaggaagaaatataaa
gtgaaccaaaagatcatatttgatgaggagggagaggttgctcagcagtttcctccagtg
cagaaaacctttatccagatggatgaagatgatgacaaaggtggtataaacattgacaaa
acagtagtgttgatgcgagaagaagataaacatgataaacaagtatttagacaacgagtt
aaagacaaacacagagctgaaaaactgaagaaaaaagctggaagaaaaaggcggaaacga
ggggatgagagtgaggaggaagatattggtgtacaattatctataaatccagaagatgaa
tgtaatattgatttattgccagatcctgatcaatatttcaataaaagtgaaaaacatagc
catgctgagaaagaatttagtttttcaaatacgaagaaaaagagaaagaagcaagctgat
gtcaaaaagaaaatgttgattgatgacatgggattaaaagaagaggaagaattagcattg
catttactgatgaaagattcatga
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