Saccoglossus kowalevskii (acorn worm): 102810066
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Entry
102810066 CDS
T04123
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102810066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
102810066
Membrane trafficking [BR:
sko04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102810066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_WDR5
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_NWD2_C
zf-RING_Vps41
EIF3I
TPR_LAA1_C
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_EML
Zein
Beta-prop_WDR3_1st
PHD
PQQ_2
DUF6402
Motif
Other DBs
NCBI-GeneID:
102810066
NCBI-ProteinID:
XP_006819234
UniProt:
A0ABM0MGU3
LinkDB
All DBs
Position
Un
AA seq
1338 aa
AA seq
DB search
MADGLESALAATANVPGSDTLDFDDSDLDIPELDDVPTLESILNEPDDVFELDDDDFGLF
STEPGDQSLDSISVGSAASLDKSPQKQRKKSSVMYAVHGSIIRHVMLKGISSQLMSAADR
VDAGKPTAMAVSALISIGTSHGIVLVFDPKQALKWCLGSTAVGAQYGAVSAISINNDCSR
LLAGFAKGQVTMWDLSNGKLLRTITDAHPPGSAVLHIKFTDDPTLAICSDSGGSVFELSF
KRVMGMRSCESRCLFSGSRGEVCTIEPLHMNASVKDHPLQDVSLLAMATLSKVLIVTIKP
KLQVFVLFLSQGDQTTLPLLAWQFVIIQISDSARVIDPVLAYARGNIIHFYQIMCQDAAN
IKFAPLQKIEVPYILLNIAWFNSRTLVIVDTTERLHIVDVRTEEELEVIDLVDVELVYGS
SYFKSLATGGNVSKALALAGEHACYQSVVGYTGQLLLLGTKSIHVMTMRTWKERIDLLVK
LVKFKDALMLALSFYTGRAKAVVGLIGSQQKRKAAVADKILELLFTFVDLSLTQNCPGRG
KIDVLEKHFQEVVPVCVEYCLVLGRTDILFGTIYEKFSEDTIAKGVYLECLEPYILNDKL
VSVTPGVMKDFIQHYEMKGMLQNVEACIVHMEVASLDIHQVVNLCWTHGLYDAILYVYNK
GMRDYVTPLEDLLRVLESAMKSAKQLTDDQIKLGNKLLVYISCCLAGRSYPFGDIPEDIV
HDVKESVFRCITKLHTKDHNEDESAYPYLRTLLQFDTREFLNVLALAFEEPEFDSQEGIY
PLNVQSRQHVVDILLQIMVESVGFTPTQVGCLFTFLARQMAKHENSILVNRLLFEQVLEF
LSNPDDEGRHEERQQALLELLNAGGLQQVNENRLLSLAENARFYRVCELLYDKRREYYKI
LDCYLKDAYRQNHAFSFVHAIMSETVYTQKEKDELQQQTLSHLEELVTIDSKATAQLVLT
DLTLSIADIVTKLESQQVVLYEFLKGLFEYRENTGSAIHIRDQTVIEPEVQEKYIELMCK
YNISNVYHYIRNTDNYRLEETLKVCENKQIYLLEQAGDVHGAFGIMLEKLQNKVRLFMEL
VTQNDEGQAEFKELTKHVLNSMMGYIALPAILQKTMQDPTYSSGKFGDMKELILGMLDTY
NYEKTLLKTTNNLLNHDLHGSLVNLTMAVNKGLAAKDDNCHVCSKPHTDQDQQSVCIFSC
GHAYHTLCLLSVGSCTMIDGQQHWFCYQCNTNKRRGVKDRKKSLTQLSPTSKSPPNINVV
QNGKKKVQDTQLDAAQEMALSKLRQATRGPSRLAILSELSRANRSHPSRKGVVSADSILH
KESFKLHLSAPPLDTSLE
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggattggaaagtgcacttgctgccactgcaaatgttccgggcagtgacaca
ttagattttgatgatagtgaccttgatattcctgaacttgatgatgtacctactttagag
tcaatattaaacgagcctgatgatgtgtttgagctggatgacgatgactttgggttgttt
tcaacggagcccggtgaccaatcactcgattccatcagtgtcggcagtgctgctagtttg
gataaatcaccacagaaacagaggaagaagagtagtgttatgtatgccgtccatgggtca
ataatcagacatgttatgttgaagggaatatcgtcacagctgatgtcagcggctgatcga
gtagatgcaggtaaacctacagccatggcggtatcagcgttgatatcgattgggacgtca
catggcattgttttggtatttgatcccaaacaagcattgaaatggtgtctcggtagtaca
gcagtcggtgctcagtacggtgctgtctctgctatcagtatcaataacgactgttctcgg
ttgttggctgggtttgcaaaaggacaggttacaatgtgggatttatcaaatggtaaatta
ttacgaacaataaccgacgctcatccaccgggatctgccgtactacatattaagtttact
gatgacccaactcttgccatttgtagtgatagcggaggttctgtatttgaacttagcttt
aagagagtcatgggaatgcgatcttgcgaatcaagatgtctgttttctggaagtcgtggt
gaagtatgtaccattgaacctttacatatgaatgcttctgtcaaggatcatcctttgcaa
gacgtttctcttctcgccatggcaacactatctaaggtattgatagtcactataaaaccc
aaactacaagtatttgttttatttttatcccagggtgaccagactacattacctctatta
gcatggcagtttgtaattatacaaatatcagattcagctcgagttattgacccagtgtta
gcctatgcaaggggcaatattatccacttctatcagattatgtgtcaggatgctgctaac
ataaagtttgctccgctacaaaaaatagaagtgccatatattctacttaatattgcatgg
ttcaattctaggactttggtaatagtcgacaccactgaaagattacatattgttgatgta
agaacagaagaagagttagaagtaattgatttggtcgatgtagaattagtttatggatct
agttattttaaatccctggctactggtggcaatgttagcaaagcattggctttggcaggg
gagcatgcatgttatcagtctgtcgttggttacactggacaactgttgttactcggcaca
aagtcaattcatgttatgactatgagaacatggaaagagagaattgatttgttagtaaaa
ctggtgaagttcaaagatgctctcatgctggcattgtcattttacacaggtagagccaag
gctgttgttggcctcataggaagtcaacagaaacgtaaagcagctgtcgcagacaagata
ctagaattgttgttcacgtttgttgatttatcactgactcagaactgtcctggaagaggt
aaaattgatgtcctagaaaaacatttccaggaagttgttccagtatgtgttgaatattgt
ttagtgcttggaagaacagatatactatttggaactatttatgagaaatttagcgaagat
accatcgctaaaggcgtgtatctggagtgtcttgaaccatatattctgaatgataaactt
gtgtcggtgacgccgggtgtgatgaaggatttcatacagcattatgagatgaaaggcatg
ttgcagaatgtagaagcttgtattgtccacatggaggttgcaagtctagatatacatcag
gttgttaatctgtgttggacgcatggtttatacgacgctattctctatgtctataataaa
ggaatgcgtgactacgtcacaccactagaagaccttctaagggttttagagtctgccatg
aaatctgcaaaacaacttacagatgatcagattaaactgggaaataaattacttgtatat
ataagttgttgtttggcaggaagatcttatccttttggtgatattccagaagatattgtt
catgatgtaaaagaatcggtattccgctgcataactaaactgcatactaaagatcataat
gaagatgagtccgcatacccgtacttgagaacgttactccagtttgatacaagggagttt
ctcaatgtgttagctttagcatttgaagaacctgagtttgactcacaagaaggaatatat
cccttgaatgttcaatctaggcagcacgtcgttgatatattgttgcagattatggtggaa
agtgtgggatttacgccgactcaggttggatgtttattcacattcctagcacggcagatg
gcaaagcatgaaaacagtatactcgtcaaccgcttactctttgaacaggttttagagttc
ttatcgaaccctgatgatgagggccgtcatgaagaacgtcaacaagcactgttggaatta
ctgaatgctggtggactgcaacaagtaaatgaaaacagactattatcattggctgaaaat
gctcggttttatcgtgtctgtgaattgctgtatgataaacgaagagaatattacaaaatc
ctggattgttacttgaaagatgcttatcgacagaatcatgccttttcgtttgtccatgct
attatgtccgagacagtctatacgcaaaaggaaaaagatgaactgcagcaacaaacgctg
tcccacttagaagaactggtgaccatagatagcaaagcaacagcacagctcgtgttgaca
gatttaacactctctattgctgacatcgtcacaaaacttgagagtcaacaagttgttttg
tatgagttcctgaaaggtttatttgaataccgtgaaaatactggcagcgcaatccatata
cgagatcagactgtgatagaaccggaagtacaagaaaaatacatagaattgatgtgtaaa
tacaacattagtaacgtctatcattatatcagaaatactgataactataggctggaggaa
acgttgaaggtatgtgaaaacaaacaaatctatttattggaacaagcgggtgatgtgcac
ggagcctttggaatcatgttagaaaagttacaaaataaagtcagattgtttatggagtta
gtcacacagaatgatgaagggcaagctgaattcaaagagttgacaaagcatgtactgaac
agcatgatgggatacatagctctcccagctattctacagaaaacaatgcaggaccctacc
tacagtagtggtaaatttggtgatatgaaggaattaattctgggaatgttagatacttat
aattatgaaaagactttattaaagactaccaataacttattgaatcatgatttacatgga
tctttggtaaatttaacgatggcagtcaataaaggattggcagccaaagacgacaattgc
catgtatgcagtaaaccacatactgaccaggatcagcaatctgtgtgtatattcagttgt
ggtcatgcctatcatacactgtgtcttctgtcagttggaagttgtactatgattgatggt
cagcaacactggttttgttatcagtgtaatactaacaaaagaagaggtgtgaaagatcga
aagaagagccttacccagttgtctccaacatctaaatctccccctaatataaacgtggta
caaaatggaaaaaagaaagtacaggatacacaattagatgcagcacaagaaatggcttta
tctaagctacgacaggctactagaggaccatctaggttggcaatcttgagtgagctgtcg
cgagctaatcgtagtcacccttctcgtaaaggagttgtttctgcagatagtattttacac
aaagaaagtttcaagctccatttatcagctccgccattagatacaagtctggaataa
DBGET
integrated database retrieval system
