Sphingomonas koreensis: BRX40_02975
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Entry
BRX40_02975 CDS
T04828
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BRX40_02975
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
skr01007
]
BRX40_02975
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skr03016
]
BRX40_02975
Enzymes [BR:
skr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BRX40_02975
Amino acid related enzymes [BR:
skr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BRX40_02975
Transfer RNA biogenesis [BR:
skr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BRX40_02975
Prokaryotic type
BRX40_02975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
APR51530
UniProt:
A0A1L6J7M6
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All DBs
Position
606398..608809
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AA seq
803 aa
AA seq
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MKFTLSWLKEHLDTDATLDQIDEALTRVGLEVEGIENPGEKLAAFRVAKVLTAERHPQAD
KLQVLTIDAGDGVPLQVVCGAPNARAGLVGVLGLPGAVVPANGMVLKVAAVRGVESNGMM
CSTRELELGEDHDGIIELPEDAPIGTSFPDYAGLNDPVFDVSITPNRQDCMGVRGIARDL
AAAGLGTLKPLDATPVKGQGAGPEVRIDAHEGCPAYYGQTVRGVTNGASPDWMQARLKAV
GQRPISALVDITNYVMIDLGRPLHVYDKAKLSGALVVRKAKAGEQVLALNEKTYTLDESI
TVIADDNGVHDIGGIMGGEDTGVSETTTDVVIECAYFDPEHIARAGQKLLLTSDARTRFE
RGVDPAFLEDGIAIATRLVTQICGGSASEVTRVGTLPRVGITTGYDPVLAETLGGLAIPA
GRQKAILESLGFTVEPLDANGDPVGIDAGFDAFRVTAPSWRRDIDGPADLVEEVIRIEGI
DNVPSTPLPRAPGVATPTATPEQKLERRMRRTAASRGLNEAVTWSFIAEKEAAAVGGGAW
TLANPISEDLKVMRPSLLPGLLMAAGRNTKRGATSVRLFEIGRRYLADAEKPTLTALLAG
DKTPRGWANGKAQPFTAYDAKAEALALLEAAGAPVGNLQVMGEAGDAWHPGQSATLRLGP
KTVLAAFGMLHPALLKQFDLDGPVAAVEIFLDAIPAKRSTGFMRPAYTPPALQAVTRDFA
FIVPAELAAGDLVRAVRGADKAVITDARLFDLFTGAGVEDGKKSLAVEVTLQPGEKSFTD
AEIKAVADKVVAAAAKLGATLRG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccctgagctggctcaaggagcacctcgacaccgacgcgacgctcgaccag
atcgacgaggcgctgacccgtgtcgggctcgaggtcgagggcatcgaaaatccgggcgag
aagctcgcggcgttccgcgtcgcgaaggtgctcaccgccgaacgccacccgcaggcggac
aagcttcaggtgctgacgatcgacgcgggagacggcgtgccgctgcaggtcgtgtgcggc
gcccccaatgcgcgcgcaggcctggtcggcgtgctcgggcttcccggcgcggtcgtcccg
gccaacggcatggtgctcaaggtcgcggctgtacgcggtgtcgaatcgaacggcatgatg
tgctcgacgcgtgagctggaactcggcgaggatcatgacggcatcatcgagctgcccgaa
gacgcgccgatcggcaccagcttccccgattatgccggcctcaacgatccggtgttcgac
gtctcgatcacgccgaaccgtcaggattgcatgggcgtgcgcggcatcgcccgcgatctc
gccgccgcgggcctcggtacgctgaagccgctcgacgccaccccggtgaagggccagggc
gccgggccggaggtgcggatcgacgcgcacgagggctgccccgcctattacggccagacc
gtgcgcggggtgaccaacggcgcttcgcccgactggatgcaggcgcgattgaaggccgtg
ggccagcgcccgatctcggctttggtcgacatcaccaactatgtgatgatcgaccttggc
cgcccgctccacgtctatgacaaggccaagctgtcgggcgcgctcgtcgtgcgcaaggcc
aaggccggcgagcaggtgctggcgctcaacgagaaaacctacacgctcgacgagagcatc
accgtgatcgccgacgacaatggcgtccacgatatcggcggcatcatgggcggcgaggat
accggcgtgtcggaaacgaccaccgatgtcgtgatcgaatgcgcctatttcgatcccgag
catatcgcgcgcgccggccagaaactgctgctcaccagcgacgcgcgcacccgcttcgag
cgtggcgtcgatcccgccttcctcgaggacggcatcgccatcgccacgcggctcgtcacc
cagatctgcggcggcagcgcgagcgaagtcacccgcgtcggcaccttgccgcgcgtcggc
atcaccaccggctatgatccggtgcttgccgaaaccctgggcggcctcgccattcctgcc
gggcgccagaaggcgatcctcgaatcgcttggcttcacggtcgaaccgctcgacgcaaac
ggcgatccggtcggcatcgacgcgggcttcgacgctttccgcgtcaccgcgccgagctgg
cgccgcgacatcgacggcccggccgacctggtcgaggaagtgatccggatcgaggggatc
gacaacgtcccctcgaccccgctaccgcgcgcgcccggcgtcgccacgccgaccgcgacg
cccgaacagaagctcgaacgccgcatgcgccgcaccgccgcgtcgcgcggcctcaacgag
gcggtgacgtggagcttcatcgccgaaaaggaagccgcggccgtcggcggcggcgcctgg
acgctcgccaacccgatcagcgaggatttgaaggtcatgcgcccctcgctgctgcccggc
ctgctgatggccgccggccgcaatacgaaacgcggcgccaccagcgttcgcctgttcgag
atcggccgccgttacctcgccgatgccgagaagccgacgctgaccgccctgctcgcgggc
gacaagacgccccgcggctgggcgaacggcaaggcacagcccttcaccgcctatgacgcc
aaggccgaggcgttggcgctgctcgaagccgcgggggcgccggtcggcaaccttcaggtg
atgggggaagcgggtgacgcctggcatcccggccagtcggcgacgctgcggctcgggccg
aagacggtgctggcggcgttcggcatgctgcatcctgcactgctcaagcagttcgacctc
gacggtcccgtcgcggcggtcgagatcttcctcgacgcgattccggccaagcgctccaca
ggcttcatgcggccggcctacacgccgcccgcgctgcaggcggtgacccgcgacttcgcc
ttcatcgttcccgccgagctggcagcgggcgacctcgtccgcgcggtcaggggtgcggac
aaggcggtgatcaccgacgcccggctgttcgacctgttcaccggcgcgggcgtcgaggac
ggcaagaaaagcctcgccgtcgaagtgacgctgcaaccgggtgagaaaagcttcaccgac
gccgagatcaaggcggtggccgacaaggtcgtcgccgcggcggccaagctgggcgcgacg
ctgcggggctga
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