Sphingomonas koreensis: BRX40_03030
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Entry
BRX40_03030 CDS
T04828
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00300
Lysine biosynthesis
skr00470
D-Amino acid metabolism
skr01100
Metabolic pathways
skr01110
Biosynthesis of secondary metabolites
skr01120
Microbial metabolism in diverse environments
skr01230
Biosynthesis of amino acids
Module
skr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BRX40_03030
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRX40_03030
Enzymes [BR:
skr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BRX40_03030
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
APR51540
UniProt:
A0A1L6J7N3
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All DBs
Position
619986..621245
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AA seq
419 aa
AA seq
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MDHFNRKNGVLHAEDVSIPAIAAEVGTPVYVYSTATLERHASALKNALAGLPSVHLAFAI
KANPNLAVLGVLARQGYGADVVSGGELKRALAAGMPAEDVVFSGVGKTRAELQLGLDEGI
GQFNLELEEEGEVLADLAHAQGKTAPAVLRVNPDVDAGTHAKISTGKAENKFGVAIDRAL
EIFDRLAKRPGLNLRGVAIHIGSQLTELSPLEAAYKRVGELVAQLRAAGHTITHVDLGGG
LGVPYHAGQTVSTAEEFGAMVARVTQGWNVTLMFEPGRFICGNAGVLVTEVIWVKPAAGN
PYVIVDAAMNDLARPALYDAYHEFEAVEPTGEKFVANIAGPVCETGDTFAMGREIDVVKS
GDLAVFRTAGAYGATMASTYNSRALVPEVLVSGDRFAVVADRIQPETIMGAERVPEWVR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcaaccgcaagaacggcgtccttcacgccgaggacgtctccatccccgcg
atcgcggccgaagtcggcacgccggtctatgtctattcgaccgccaccctggaacgccac
gcctccgcgctcaagaacgcgctcgccggcctgcccagcgtccacctcgcctttgcgatc
aaggcgaaccccaaccttgccgtgctcggcgtgctggcgcgtcagggctatggcgccgac
gtcgtctcgggcggtgagctcaagcgcgcgctggcggccgggatgcccgcagaggacgtc
gttttctcgggcgtcggcaagacgcgtgccgagcttcagctcggcctcgacgagggcatc
ggccagttcaacctcgagctggaagaggaaggcgaagtccttgccgatctcgcccatgcg
cagggcaagaccgcgcccgcggtgctgcgcgtgaaccccgatgtcgatgcgggtacccac
gccaagatctcgaccggcaaggccgagaacaagttcggcgtggcgatcgaccgcgcgctc
gagatcttcgaccggcttgccaagcgccccggcctgaacttgcgcggcgtcgccatccat
atcggcagccagctcaccgagctttccccgctcgaggccgcatacaagcgcgtcggggaa
ctggtcgctcagctgcgcgcagccggccacaccatcacccatgtcgatctgggcggcggg
ctcggcgtgccctatcatgccggccagaccgtctcgaccgccgaggaattcggcgcgatg
gtggcgcgcgtgacccagggctggaacgtcacgctgatgttcgagccgggccgcttcatc
tgcggcaatgccggcgtgctggtgaccgaggtcatctgggtcaagccggccgcgggcaat
ccctatgtcatcgtcgatgccgcgatgaacgaccttgcccgcccggcgctgtacgatgcc
tatcacgaattcgaggcggtcgagccgaccggcgagaagttcgtcgccaatatcgccgga
ccggtgtgcgagaccggcgacaccttcgcaatggggcgcgagatcgatgtggtgaagtcc
ggcgatctcgccgtgttccgcaccgccggcgcctatggcgcgaccatggcctccacctat
aacagtcgcgcgctggtgcccgaggtgctggtgtcgggcgacaggttcgccgtggtcgcc
gaccgcatccagcccgaaaccatcatgggcgccgaacgcgtgcccgagtgggtccggtga
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