Sphingomonas koreensis: BRX40_03405
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Entry
BRX40_03405 CDS
T04828
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skr03016
]
BRX40_03405
Enzymes [BR:
skr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BRX40_03405
Transfer RNA biogenesis [BR:
skr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BRX40_03405
Prokaryotic type
BRX40_03405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
APR51607
UniProt:
A0A1L6J6Z5
LinkDB
All DBs
Position
complement(688923..689837)
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AA seq
304 aa
AA seq
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MHGWIVIDKPLGLGSTQGVSAVKRALRDCGYGPKLRDLPKVGHGGTLDPLATGVLPIAVG
EATKLAGRMLDSDKVYDFTIRFGEETDTLDLEGTVIAVSTVYPSLAQVEAVLPRFTGPIE
QLPPNYSALKVDGERAYDLARKGESFELAPRAITIHALSVTGWTDSGAGDLMDVTLTAHV
SKGTYIRSLARDIALALGTVGHVTMLRRFKAGPFTLESAISLDKLAEAAKGRTLEHCLLP
LRAGLDDIPALTLEPGQAGALRQGKVLTGIAMEDGQYFALEGDTPVALVEVSDGIVRVVR
GFNL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggatcgtcatcgacaaaccgctggggctcggttcgacccagggggtgagc
gcggtcaagcgcgcgctgcgtgactgtggctatgggccgaagctgcgcgacctgcccaag
gtcgggcatggcggcacgctcgatccgctggcaaccggcgtgctgccgatcgcggtaggg
gaggcgaccaagctcgccgggcggatgctcgatagcgacaaggtttacgactttacgatc
cgcttcggcgaagagacggatacgctcgacctcgaagggacggttatcgccgtctcaacc
gtatacccgtcactcgcgcaggtcgaggccgtgctgccgcgtttcaccggcccgatcgaa
cagctgccgccgaactattccgcactgaaggtggacggcgagcgggcctatgaccttgcc
cgcaagggcgaatcatttgaactcgcgccccgtgccattaccatccacgcgctgtcggtt
acgggttggactgatagcggcgcgggcgacctgatggatgtcaccctcaccgcgcatgtc
tccaagggcacctatatccgcagcctggcgcgcgacattgcccttgcgctcggcaccgtc
ggccatgtaacgatgcttcggcggttcaaggcggggccgttcaccctcgaatccgcgatt
tcgctggacaaactggccgaagccgctaagggccgcacgcttgaacattgcctcctgccg
ctgagggcggggctggacgacatcccggctctaactctcgaacccggtcaggcaggggct
ctccgtcaggggaaagtgctgaccgggatcgccatggaagacggccaatactttgcgctc
gagggcgatacgcccgtcgcgctggtcgaggtttcggacggtatcgtccgggtcgtccgc
ggcttcaacctgtag
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integrated database retrieval system
