Sphingomonas koreensis: BRX40_03565
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Entry
BRX40_03565 CDS
T04828
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
skr
Sphingomonas koreensis
Pathway
skr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
BRX40_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skr03019
]
BRX40_03565
03009 Ribosome biogenesis [BR:
skr03009
]
BRX40_03565
04131 Membrane trafficking [BR:
skr04131
]
BRX40_03565
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skr04147
]
BRX40_03565
Messenger RNA biogenesis [BR:
skr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
BRX40_03565
Ribosome biogenesis [BR:
skr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
BRX40_03565
Membrane trafficking [BR:
skr04131
]
SNARE
SNARE associated proteins
Others
BRX40_03565
Autophagy
Aggrephagy
Other aggrephagy associated proteins
BRX40_03565
Exosome [BR:
skr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BRX40_03565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
AAA_22
CDC48_2
AAA_2
AAA_14
TIP49
nSTAND3
IstB_IS21
AAA_28
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_18
AAA_7
nSTAND_NTPase5
DUF815
Vps4_C
Sigma54_activat
TsaE
ABC_tran
AAA_30
AAA_11
AAA_24
AAA_17
AAA_3
AAA_lid_PRS2_C
Parvo_NS1
NB-ARC
Zeta_toxin
ATPase
SLFN-g3_helicase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
APR51634
UniProt:
A0A1L6J6Y0
LinkDB
All DBs
Position
720126..722417
Genome browser
AA seq
763 aa
AA seq
DB search
MAETDTPTRKLQVANSRPEDSGRGLAHLPRTLMGELGLQQGDVIEIVGKRITPARAVFPY
PEDEGLELLRIDGLQRANAGVGSGDFVEIRRGESRPATRVVFAPARKDLRLEGSANALKR
TFIGRPLAQGDTVSTVGQQRVADMPPNVLQHLRAPAYALQEIRLTVVSAAPRGIVHIDES
TEIELRTDYEEAKEFRRADVTYDDIGGMAATIDQLREMVELPLRYPELFQRLGVDPPKGV
LLHGPPGTGKTRLARAVANESDASFFLINGPEIMGSAYGESEKRLREVFEEANANSPAII
FIDEVDSIAPKRGQVTGEAEKRLVAQLLTLMDGLEARANVVIIAATNRPEALDEALRRPG
RFDREIVVGVPDERGRREILGIHTRGMPLGDKVDLTELARTTFGFVGADIAALTREAAIE
AVRRIMPKLNLEEKTIPPEVLETLAVTREDFVEALKRVQPSAMREVMVQKPNVHWEDVGG
LDDAQMRLKEGVELPMKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIA
TKSSDLLSKWYGESEQQIARLFARARQVAPCVIFIDELDSLVPARGSGMGEPQVTERVVN
TILAEMDGLEELQSVVVIGATNRPNLIDPALMRPGRLDELIYVGVPDAAGRERILKIQTA
KMPLADDVDLGSIAERTERFTGADLEDVVRRAGLVALRESLTNTHVTMAHFEAALADSRA
TVTPEMEAEYAQLVARMKQDAVALNPIGFIAPGMLQSRKKDAG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaccgacaccccgacacgcaagctccaggtcgccaattcgcgccccgaagac
agcgggcgtggcctggcccatctgccgcgcaccctgatgggcgagctcggccttcaacag
ggcgacgtgatcgagatcgtcggcaagcgcatcactccggcgcgcgcggtattcccctat
cccgaggacgaagggctggagctgctgcgcatcgacggccttcagcgcgccaatgccggg
gtcggatcgggcgatttcgtcgagatccgccgcggcgaatcgcgccctgcgacgcgcgtc
gtgttcgcacccgcacgcaaggacctgcgcctcgaaggatcggccaacgcgctcaagcgc
accttcatcggacgtccgctggcgcagggcgacacggtctcgaccgtcgggcagcagcgc
gtcgcggacatgccgcccaacgtgctccagcatctgcgcgcgcccgcctatgcgttgcag
gaaatccgcctgaccgtggtgtcggcagcgccgcgcggcatcgtccatatcgacgagagt
accgagatcgagctgcgcaccgattatgaggaagccaaggaattccgccgcgccgacgtc
acctatgacgatatcggcgggatggccgcgacgatcgaccagctgcgcgagatggtcgag
ctgccgctgcgctaccccgagctgttccagcgcctgggcgtcgacccgcccaagggcgtg
ctgctgcatgggccgcccggtaccggcaagacgcgcctcgcgcgcgccgtcgccaacgag
agcgacgccagcttcttcctgatcaacgggcccgagatcatgggatcggcctatggcgaa
tcggagaagcggctgcgcgaggtgttcgaggaggcgaacgccaattcgcccgcgatcatc
ttcatcgacgaggtcgattcgatcgcgcccaaacgcggccaggtgaccggcgaggccgag
aagcggctggtcgcccagctgctgacgctgatggacgggctggaggcgcgcgccaatgtc
gtgatcatcgccgcaaccaaccggcccgaggcgctcgacgaagcgctgcggcggccgggc
cggttcgaccgcgagatcgtggtcggcgtgcccgacgagcgcgggcggcgcgagatattg
ggcatccacacccgcggcatgccgctgggcgacaaggtcgacctgaccgaactggcacgc
accaccttcggctttgtcggcgccgacatcgcggcgctgacgcgtgaggcggcgatcgag
gcggtgcggcggatcatgcccaagctcaacctcgaggagaagacgatcccccccgaggtg
ctggagacgctggccgtcacccgcgaggatttcgtcgaggcgctgaaacgcgtccagccg
agcgcgatgcgcgaggtgatggtgcagaagcccaacgtccattgggaggatgtcgggggc
ctcgacgacgcgcagatgcgcctgaaggagggcgtcgagctgccgatgaaggatcccgac
gcgttccggcggctgggcatccgcccggccaagggtttcctgctctatggcccgcccggc
accggcaagacgctgctcgccaaggcggtggcgcgcgaggcggaggcgaacttcatcgcc
accaaatcgagcgacctcctgtccaaatggtatggcgagagcgagcagcagatcgcccgg
ctgttcgcccgcgcgcgccaggtggcaccgtgcgtgatcttcatcgacgaactcgattcg
ctggtgcccgcgcgcgggtcaggcatgggcgagccgcaggtgaccgagcgcgtggtcaac
accatcctggccgagatggacgggctggaagagcttcagtcggtcgtcgtgatcggtgcg
accaaccggccgaacctgatcgacccggcgctgatgcgcccgggccggctggacgagctg
atctatgtcggcgtgcccgatgccgcgggacgcgagcgtatcctgaagatccagaccgcg
aagatgccgcttgccgacgatgtcgatctgggatcgatcgccgagcggaccgagcgcttc
accggcgccgacctggaggatgtggtgcgccgcgcgggcctggtggctttgcgcgaatcg
ctcaccaacacgcatgtgaccatggcgcatttcgaagcggcgctggccgattcgcgcgcc
accgtgacacccgaaatggaggcggaatacgctcagctcgtggcaaggatgaagcaggat
gcggtggcgctgaacccgatcgggttcatcgccccggggatgcttcagagccggaagaag
gacgcaggctga
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