Sphingomonas koreensis: BRX40_04405
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Entry
BRX40_04405 CDS
T04828
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00300
Lysine biosynthesis
skr00470
D-Amino acid metabolism
skr01100
Metabolic pathways
skr01110
Biosynthesis of secondary metabolites
skr01120
Microbial metabolism in diverse environments
skr01230
Biosynthesis of amino acids
Module
skr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BRX40_04405
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRX40_04405
Enzymes [BR:
skr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BRX40_04405
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
APR54807
UniProt:
A0A1L6JG74
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All DBs
Position
886939..887877
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AA seq
312 aa
AA seq
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MRLTFTKCHGSGNDFVLLDARGTTLSDSEWGRIARSLCERDGPVGADGLLLLGEGSDGAQ
FAQKVVNADGSIPETCLNGLRCTARAGFELLGIEAATVQLKTSDAQVARDADLAPGVYTV
RTTVGPASTNPQAAGVNLAAPVIDAPVPGLPNGRNFTAVAMPNPHLIAFVDTVDVAELTA
LGDWCEAGPDLLADRANVSFVALRPDGLFVQTYERGVGLTNACGTAMGAATHVAGLTGRI
PFGAWITVHNPGGRVKARAEGPAGGDAVTIAGNATFEWDGEIEIDPATGQTGALTVTRRR
DDETAAWAALRG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgaccttcaccaagtgccacggatcggggaatgacttcgtcctgctggatgcg
cgtgggacgacgctgtccgatagcgagtgggggcggatcgcgcggagcctgtgcgagcgc
gacgggccggtcggcgcggacgggctgctgctgctgggcgaaggcagcgacggcgcgcag
ttcgcgcaaaaggtggtcaacgccgacggatcgatccccgaaacctgcctcaacggcctg
cgctgcaccgcgcgtgcggggttcgagctgctggggatcgaggcggccaccgtgcagctc
aagaccagcgacgcccaggtcgcccgcgatgccgacctggcacccggcgtctataccgtg
cggaccacggtgggaccggcatcgaccaatccgcaagcagctggggtcaaccttgcggcg
ccggtgatcgacgcaccggtgccggggctgccgaacgggcggaacttcaccgcggtggcg
atgcccaacccgcacctcatcgccttcgtcgatacggtggacgtcgccgagctgaccgcg
ctgggcgactggtgcgaggcgggaccggacctgctggccgaccgcgccaatgtgagcttc
gtcgcgctgcgccccgatggcctgttcgtccagacctatgaacgcggcgtgggcctgacc
aacgcgtgcggcacggcgatgggcgcggcgacgcacgtcgccgggctcaccgggcggatt
ccgttcggcgcgtggatcaccgtccacaaccccggcggccgcgtgaaggcgcgcgccgaa
gggcctgcgggcggcgacgcggtaacgatcgcgggcaacgcgaccttcgaatgggacggc
gagatcgagatcgacccggccaccgggcaaacgggcgcgctgaccgtgacgcgccgccgc
gacgacgagaccgccgcctgggccgcgctcaggggctga
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