Sphingomonas koreensis: BRX40_04730
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Entry
BRX40_04730 CDS
T04828
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
skr
Sphingomonas koreensis
Pathway
skr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BRX40_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_04730
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BRX40_04730
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
APR51828
UniProt:
A0A1L6J7F8
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Position
940596..941354
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AA seq
252 aa
AA seq
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MAPPPQIIRVIDLETTGDKPPAHAVCEIGWQDVALGIDGRWELYGEGGSRMVNPGRPIPP
LTMAIHHIRDEDVADAPWWHDVARPILDPWPRRVALAAHRASFEEQFCTPALTRGADWIC
TYKCALRLWSDSPGFSNQFLRYYRMPEGLEHERGLPAHRAFPDAYVTAHHLRDMLNSVSV
AQLIEWSKLPGLLPRVRYGPDRGKEWSEIDDDSLDAFLQDRDPDIRYTAEVELERRRGHG
RVLRPDRQPVLF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcccctccgccccagatcatccgcgttatcgacctcgagaccaccggcgataaaccg
ccggcgcacgccgtatgcgaaatcggctggcaggacgtcgcactgggtatagacgggcgc
tgggagctctatggcgagggcggcagccggatggtcaatcccggccgcccgattccgccg
ctgaccatggcgatccaccatatccgcgacgaggatgtcgccgacgcgccatggtggcac
gatgtcgcccgcccgatcctcgatccctggccgcgtcgtgtcgcattggcggcgcatcgc
gcgagcttcgaggagcagttctgcaccccggcgctcacccgcggcgccgactggatctgc
acctataaatgcgcactgaggctgtggagcgacagccccggcttctccaaccagttcctg
cgctactaccgcatgccggaggggctggagcatgaacgcggcctgccggcgcatcgcgcc
tttcccgacgcctatgtgacggcacaccatctgcgcgacatgctcaactcggtcagcgtc
gcgcagctgatcgaatggtcgaagctgcccggattgctcccgcgggtccgctacggcccg
gatcgcggcaaggaatggagtgagatcgacgacgattcgctcgacgccttcctgcaggat
cgcgatcccgacatccgctataccgccgaggtcgagcttgagcgtcggcgagggcatggc
cgcgtgctgcggccggaccggcagcccgtgctcttctga
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