Sphingomonas koreensis: BRX40_05080
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Entry
BRX40_05080 CDS
T04828
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRX40_05080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_05080
Enzymes [BR:
skr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BRX40_05080
DNA repair and recombination proteins [BR:
skr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRX40_05080
Prokaryotic type
BRX40_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APR51891
UniProt:
A0A1L6J7E1
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All DBs
Position
1016784..1017548
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AA seq
254 aa
AA seq
DB search
MAASGDRHFGSPPIDRRALVRTVAGERKCMAVKLHPDWLEPLQREFDSPYMASLRQFLLD
EKAAGKRIFPRGADWFRALDLTPPQDVRVVILGQDPYHGEGQAHGLCFSVQPGVRVPPSL
VNVYKELKSDLGIEPPRHGFLEHWAKQGVLLLNTCLTVEMGRAASHQGRGWEKFTDAVVA
HVNASEKPVVFMLWGSHAQKKAPSVDPRHLVLKSVHPSPLSAHGGFFGCRHFSKANAFLE
AKGRGTIDWALPAI
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccggtgaccggcatttcggctctcctccgattgacaggcgcgcgctggtt
cgcacagtcgcgggcgaaaggaaatgcatggccgtcaagctgcacccggattggctcgaa
ccgcttcagcgcgaattcgacagcccgtacatggcctcgctgcgccagttcctgctcgac
gaaaaggcggcagggaaacgcatcttccccaggggtgccgactggttccgcgcgctcgac
ctgaccccgccgcaggacgtgcgcgtcgtcatcctcgggcaagacccctatcatggcgag
gggcaggcgcatggcctatgcttctcggtccagcccggcgttcgcgtgccgcccagcctc
gtcaacgtctacaaggagctcaagagcgacctcggcatcgagccgccgcgccacggcttt
ctggaacattgggcgaagcagggcgtgctgctgctcaacacttgcctgacggtcgagatg
ggccgtgccgcctcgcatcagggccgcgggtgggagaaattcaccgacgccgtggtcgcg
catgtcaacgcgagcgagaagcccgtggtgttcatgctgtggggcagccatgcgcagaag
aaggcgccgtcggtcgatccgcggcatctggtgctgaagtcggtccacccctcgccgctg
tcggcgcatggcggctttttcggctgccgtcatttctcgaaggcgaacgcgttcctcgaa
gcgaagggcagagggacgatcgattgggcgctgccggctatttga
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