Sphingomonas koreensis: BRX40_05085
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Entry
BRX40_05085 CDS
T04828
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skr02000
]
BRX40_05085
Transporters [BR:
skr02000
]
Other transporters
Pores ion channels [TC:
1
]
BRX40_05085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
TrbC_Ftype
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APR51892
UniProt:
A0A1L6J7G6
LinkDB
All DBs
Position
complement(1017644..1019809)
Genome browser
AA seq
721 aa
AA seq
DB search
MKRLTLLLATTAFALPALAQTSEHQERDRSSRSTVHGDADADVVITAPYVADLDLLAGTS
VVSGDELVRDIRGQIGDTLTRVPGVSATSFSPGASRPVLRGFQGERVRVLTDGLGSLDVS
NTSTDHAVTIDPLTAERIEVLRGPAVLLFGSQAIGGAVNVIDRRIPRAVPENGFHIDAVG
TYGSAADERSGGAAVDVALTPTIVLHADGSYRKTDDLRTGGYILSKPLRAQQLAIAAEET
EEGHLDEAAEATALANSRGRLPNSGTETYTLGGGVALINDGGSLGFSVGYYDTKYGVPER
PAAGHDHDADGDEGHDHGAVTIGMKQWRADMRGEVNVGGGFLDKIRVRAGFADYEHTEFE
GTDIGTVFNSEAIEGRLELVQANRGGWRGVIGFQGLTRKFSAVGEEAFVAPNTTAQYGVF
ALQEVNLGKLGLEFAGRYEHTDVRSNAVKIGLDEDAPLVRVDRGFDAFSGAVGLSYEVAP
EVKIGINGSRAVRAPSGEELFSNGPHIATQAYEVGNPNFALEKSWGLELYARGRAGPVRF
QISGYANWFDNYIYENDTGTRFENDEFDLPIFQYLQADARYYGIEGEISATLLRAGDFSL
SGNLVADYVNAELGNGSPVPRIPPLRVLGGLDASYNGFGGRVEVEHSTRQSRVANFETET
PAFTLVNASLTWHPFGEKRETAIILSANNIFDVEARRHASFTKDFVPLAGRDIRVAARVS
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtctcaccctcctcctcgccaccaccgcctttgccctccccgccctcgcccag
accagcgagcatcaggaacgcgacagatcgagtcgcagtacggtgcatggcgatgcggat
gccgatgtggtgatcaccgccccctatgtcgccgatctcgaccttctcgccggaacctcg
gtggtgtcgggcgacgagctcgtgcgcgacattcgcggacagatcggcgacacgctgacg
cgcgtaccgggcgtttccgccacctcgttcagcccgggcgcctcgcggccggtgctgcgc
ggcttccagggcgagcgcgtgcgtgtgctgaccgacggtctcggctcgctcgacgtctcc
aacacctcgaccgaccatgcggtcacgatcgatccgctcaccgccgagcggatcgaggta
ctgcgcggccctgcagtgctgctgttcggcagccaggcgatcggcggcgccgtcaatgtg
atcgatcgccgtattccgcgcgcagtgccggagaacggtttccatatcgacgcggtcggc
acttatggctcggcggcggacgagcgcagcggcggcgcggcggtggatgtcgcgctgacc
ccgaccatcgtgctccacgccgatggcagctaccgcaagaccgacgatcttcgcaccggc
ggctatatcctgagcaagcccctgcgcgcccagcagctggcgatcgccgcggaggaaacc
gaggaaggccatctcgacgaggcggccgaagcgaccgcgctcgccaacagccgcggccgc
ctgcccaacagcgggaccgagacctatacgctgggcggcggcgtcgcgctgatcaacgat
ggcggcagcctcggcttttcggttggctattacgacaccaaatacggcgttcccgaacgc
ccggccgcgggtcacgaccatgacgcggacggcgacgaaggccacgaccatggcgcggtg
acgatcggcatgaagcagtggcgcgccgacatgcgcggcgaggtcaatgtcggcggcggc
ttcctcgacaagatccgcgtgcgcgccggcttcgccgattacgagcataccgagttcgag
ggcaccgacatcggcacggtgttcaactccgaagcgatcgaaggacggctcgagctggtc
caggcgaatcgcggcggctggcgcggcgtgatcggcttccagggcctgacacggaagttc
tccgcagtgggcgaagaggcgttcgtcgcgcccaacaccaccgcgcaatatggcgtgttc
gcgctgcaggaagtcaatctcggcaagctcggcctcgagttcgccgggcgctacgaacat
accgatgtccgctcgaatgcggtcaagatcgggctggacgaggatgcgccgctggtacgg
gtcgatcgcggcttcgacgcattctccggcgcggtcggcctgtcctacgaggtcgcgccc
gaggtcaagatcggcatcaacggctcgcgcgccgtgcgcgcgccgtcgggcgaagagctg
ttctccaacggcccgcatatcgcgacccaagcctatgaagtcggcaatccgaacttcgcg
ctcgagaagagctggggcctcgagctttatgcccgcggccgcgcggggccggtgcggttc
cagatcagcggctatgccaactggttcgacaattacatctacgagaacgacaccggcacg
cgcttcgagaacgacgagttcgacctgccgatcttccagtatctgcaggcggatgcgcgc
tattacgggatcgagggcgagatttcggcgacgctgctgcgcgcgggcgacttctcgctc
tccggcaatctcgtcgccgactatgtcaatgccgagctcggcaatggcagcccggttccg
cggatcccgccgctgcgcgtgctgggcggactcgatgcgagctacaacggctttggcggc
cgcgtcgaggtcgagcattcgacccgccagtcgcgcgtcgcgaacttcgagaccgagacc
ccggccttcaccctcgtcaacgcctcgctcacctggcacccgttcggcgagaagcgcgag
accgcgatcatcctgtcggccaacaacatcttcgacgtcgaggcgcggcggcacgcatcg
ttcaccaaggatttcgtgccgcttgccggccgcgacatccgcgtggcggcccgggtaagc
ttctaa
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