Sphingomonas koreensis: BRX40_07510
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Entry
BRX40_07510 CDS
T04828
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRX40_07510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skr03019
]
BRX40_07510
Enzymes [BR:
skr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BRX40_07510
Messenger RNA biogenesis [BR:
skr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BRX40_07510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APR54881
UniProt:
A0A1L6JG11
LinkDB
All DBs
Position
complement(1533765..1534958)
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AA seq
397 aa
AA seq
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MILPGASWRNQPGLDRLAATLGPGNARFVGGAVRDTLLGLPVTDVDVATPLAPEQVVDLL
EGAGIKAIPTGIAHGTITAVSSGTVVEVTTLRRDVSTDGRRATVAFTDDWREDAARRDFT
INALYADPQTGEIFDYFGGLADLGKRHIRFIGDPLQRIAEDHLRILRFFRFLARFGDTPD
QDALEACTARANDLMALSRERIRDELLKLLVAPDAVRVLRLMVERDILKPVVPEIDPAGV
ERLATLSGHEATAGLAPDPVRRLAAVLPLDPSVNEAVGARLKLSNAERQALASAIRSEFA
EGPQALAYRIGPDRAADRLLLAGDAAGARDVAGWTPPRLPLSGGTLIGRGLSKGPDVARA
LRRVEDIWIAEGFPGEDRTGQIADSVVAELLSRDSSA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatccttcccggcgcctcctggcgaaaccagcccgggctcgaccggctcgccgcgacg
cttggccccggcaatgcccgcttcgtcggcggggcggtgcgcgacacgctgctcggcctg
ccggtcaccgatgtcgacgtggcgacgccgcttgcgcccgaacaggtcgtcgatctgctc
gaaggcgcggggatcaaggcgatccccaccggcatcgcgcacggcacgatcaccgcggtg
agcagcgggacggtggtcgaggtgacgacgctgcgccgcgacgtctcgaccgacggccgc
cgcgccaccgtcgccttcaccgacgactggcgcgaggacgcggcgcggcgcgatttcacg
atcaacgcgctctatgccgatccgcagacaggcgagatcttcgactatttcggcggcctc
gccgatctcgggaaacggcatatccgcttcatcggcgatccgttgcagcgcatcgccgag
gatcatctgcgcattctgcgcttcttccggttcctcgcccggttcggcgacacgccggat
caggacgcgctcgaagcctgcaccgcccgcgccaacgatctgatggcgctctcgcgcgag
cggatccgcgacgaactgctcaagctgctcgtcgcgcccgatgcggtccgcgtgctccgg
ctgatggtcgaacgcgacattctgaaacccgtggtgcccgagattgatccagccggggtc
gaacggctcgccacgctctccggacacgaagcgacggctggtctggcgcccgatccggtc
cgccgcctcgcggcggtcctcccgctcgatccttccgtgaacgaggcggtcggtgcgcgt
ctcaagctctccaatgccgaacgccaggcgctcgcaagcgcgatccgctccgagttcgcc
gaagggccgcaggcgctcgcctatcgtattggacctgatcgcgccgccgaccggctgctg
ctcgccggcgacgccgcgggagcacgcgacgtcgcgggctggacgccgccccgcctgccg
ctgagcggcggcacgctgatcgggcgcggcctgtcaaagggcccggacgtcgcccgagcg
ctgcgccgggtcgaggatatctggattgccgagggatttcccggcgaggaccgcaccggt
cagatcgccgattcggtggtcgccgaactgctgtcgcgcgacagcagcgcatag
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