Sphingomonas koreensis: BRX40_07915
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Entry
BRX40_07915 CDS
T04828
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BRX40_07915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_07915
Enzymes [BR:
skr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BRX40_07915
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BRX40_07915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
APR52365
UniProt:
A0A1L6J8Y2
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All DBs
Position
1610756..1612135
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AA seq
459 aa
AA seq
DB search
MSDPFDDQFPPRLVAEGREGDNAAPLSVGELSLKLKRMVEGEFGHVRLRGEISGFKRAAS
GHVYLALKDADAVIDAVMWRGQADRLPFRPQDGIEVVATGKLTTYPGRSKYQIVIERMEL
AGEGALMALLEKLKAQLAGEGLFDPARKQPLPFAPQTIGVVTSPTGAVIRDILHRLADRF
PTHVLVWPVKVQGEGAAAEVAAAVRGFDAMPADGPVRRPDLVIVARGGGSIEDLWAFNEE
VVVRAVAACSIPIISAVGHETDTTLCDHAADVRAPTPTAAAEIAVPVRVELANAVATMGL
RAERYARRYHERAGERLAALVRVLPRRDALLGPQRQKADDLGAKLDRALERRVTAARGVL
DRAAGALRPAVLERKLDTLRHRLDGAGKLLDAVNPDNLLQRGYVRVGAKASGKVVASAAD
ARAAGAVTLHFRDGIVDARVERSGAKSYAGDKPEQPDLF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccccttcgacgatcagtttccgccgcggctcgtagccgaggggcgggaaggg
gacaacgctgctccgctgtcggtcggcgaattgtcgctgaagctgaagcggatggtggag
ggcgagttcggccatgtccgcctgcgcggcgagatttcgggcttcaagcgtgctgcctcc
ggccatgtctatctggcgctgaaggatgccgatgcggtgatcgacgcggtgatgtggcgc
ggccaggccgatcgcctgccgttccgcccgcaggacgggatcgaggtggtcgcgaccggc
aagctcaccacctatcccggccggtcgaaataccagatcgtgatcgagcggatggaactg
gcgggcgaaggcgcgctgatggcgttgctggagaagctcaaggcccagctggccggggag
ggcctgttcgatccggcgcgcaaacagccattgccgttcgccccgcagacgatcggcgtg
gtgacgtcgccgaccggcgcggtgatccgcgacattctccatcggctcgcggatcgtttc
ccgacccatgtcctggtgtggccggtgaaggtgcagggcgagggcgccgcggccgaagtg
gcggcggcggtgcgcgggttcgacgccatgccggcggatggccccgtccggcggcccgat
ctggtgatcgtcgctcgcggtggcgggtcgatcgaggatctgtgggcgttcaacgaggag
gtcgtggtgcgcgcagtcgcggcttgttcgatcccgatcatctcggcggtcgggcacgag
accgacacgacgttgtgcgaccatgccgccgatgtgcgcgcgccgacgccgaccgcggcg
gcggagatcgcggtgccggtgcgtgtcgagctcgccaatgccgtcgcgacgatgggcctg
cgcgccgagcgctatgcgcgtcgctatcacgagcgggccggcgagcggctggcggcgctg
gtgcgcgtgctgccgcggcgcgacgcgctgctggggccgcagcgccagaaggcggacgat
ctgggcgcgaagctcgaccgcgcgctggaacggcgggtgacggcggcgcgcggggtgctc
gaccgggcagccggcgcgctgcggccggcggtgctggagcgcaagctcgacacgctgcgc
catcggctggatggggcaggcaagctgctcgacgcggtcaatcccgacaatctgctccag
cgcggctatgtgcgcgtcggtgcgaaggcgagcggcaaggtggtggcgagcgcggcggat
gcgcgggcggcgggggccgtgacgctgcatttccgcgacggtatcgtcgatgcgcgggtt
gagcgcagcggcgccaaatcctatgctggcgacaagcccgaacagcccgacctgttctga
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