Sphingomonas koreensis: BRX40_08010
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Entry
BRX40_08010 CDS
T04828
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BRX40_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_08010
Enzymes [BR:
skr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRX40_08010
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BRX40_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
zf_Rg
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
APR52380
UniProt:
A0A1L6JA32
LinkDB
All DBs
Position
complement(1634208..1636373)
Genome browser
AA seq
721 aa
AA seq
DB search
MSRARVIVLNSALGPLDYRVPHGMAVEPGSIVVAPLGPRQLVGVVWEAERLPVEEIGDNR
LRNLIGVADAPPVPAPLRRLVEWTANYYLAPLASVLRMALSSTSALEGGRTIVEYRATGE
MPGRMTAQREQALERIGDRQGLIRELATIADVSEAVIRGLVKIGAIEGVAVDLDTPYPMP
DPAFAPPALSDVQSEAAATLRGAVAAETFQPFLLDGVTGSGKTEVYFEAVAAAIDAGRQS
IVLLPEIALTEPFLKRFHARFGVEPVAWHSGLRQSQRRRAWRAIASGEALVTVGARSALF
LPYPNLGLIVVDEAHETSFKQEEGVHYHARDVAVMRGHFERCPVVLASATPAIETRQQVA
LGRYTEVKLPGRYGAAEMPDIEAIDLLAEQPPRGRWLAPRLVKAIDEALERKEQALLFLN
RRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLISRLACHHCGHAIPTPRACPECDSEDSLV
ACGPGVERIADEVAALFPDAKTAIVTSDTIWSPAKAAEFVNRMEAGDIDIVVGTQLVTKG
YHFPNLTLVGVVDADLGLEGGDLRAAERSFQQIMQVAGRAGRGEKPGTVLIQTHSPKAPV
MRALVSGDAESFYAAETQARREAGAPPFGRFAAIIVSSEDKDAALETARLIGRAAPQVEA
MQVFGPAPAPLAMLRGRHRFRLLVHARRALDVQDVIRDWLGGIEWSAKVRVVVDVDPYNF
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcccgcgtcatcgtcctcaactccgcgctcggcccgctcgactatcgcgtg
ccccacggcatggcggtggagccggggtcgatcgtcgtcgccccgctcgggccgcggcag
ctcgtcggcgtcgtatgggaggccgaacggctcccggtcgaggagatcggcgacaaccgc
ctgcgcaatctgatcggggtcgccgacgctcccccggtccccgcaccgctccgccgcctg
gtcgaatggaccgccaactattacctcgcgccgctcgcctcggttctgcggatggcgctt
tcctccacgtcggcgctggagggcggccggaccatcgtcgagtatcgcgcgaccggcgaa
atgcccgggcggatgaccgcgcagcgcgaacaggcgcttgagcggatcggcgaccggcaa
ggcctgatccgcgagctggcgacgatcgccgacgtgtccgaagccgtgatccgcggtctc
gtgaagatcggcgcgatcgaaggcgtcgcggtcgatctcgacaccccctacccgatgccc
gatccggccttcgccccgcccgcactgtccgatgtccagtccgaagccgccgcgaccctg
cgcggcgccgtcgctgccgagaccttccagcccttcctgctcgacggcgtcaccggatcg
ggcaagaccgaagtctatttcgaggccgtcgccgccgcgatcgacgcgggcaggcagagc
atcgtcctcctccccgaaatcgcgctgacagagccctttctcaagcgcttccacgcgcgg
ttcggggtcgagccggtcgcgtggcattcgggcctgcgccagtcgcaacgccgccgggcc
tggcgcgcgatcgccagcggcgaggcgctggtcacggtcggcgcgcgctcggccttgttc
ctcccctaccccaatctcggcctgatcgtggtcgacgaggcgcacgagaccagcttcaag
caggaggaaggcgtccattatcacgcgcgcgacgtcgcggtgatgcgcggccatttcgaa
cgctgcccggtggtgctcgccagcgccaccccggcgatcgagacgcgccagcaggtcgcg
ctcggccgctataccgaggtcaagcttcccggccgctacggcgctgcggaaatgcccgat
atcgaggcgatcgacctgctcgccgaacagcctccacgcggccgctggctcgccccccgt
ctcgtcaaggcgatcgacgaggcgctcgagcgcaaggaacaggcattgctgttcctcaac
cgccgcggctacgcgccgctcaccctgtgccgcacctgcggccatcgcttccaatgcccc
aattgcaccgcgtggatggtcgagcatcgcctcatcagccgcctcgcctgccatcattgc
ggccacgccatcccgaccccgcgcgcctgcccggaatgcgacagcgaggacagcctggtc
gcctgcggcccgggcgtcgagcgcatcgcggacgaggtcgcggcgctgttccccgacgcc
aagaccgccatcgtcacctcggacacgatctggtcccccgccaaggcggcggagttcgtc
aaccggatggaggcaggcgacatcgacatcgtcgtcggcacccagctggtgaccaagggc
tatcacttccccaatctgacgctggtcggggtggtcgacgcggacctcggcctcgagggg
ggcgacctgcgcgcggccgagcgcagctttcagcagatcatgcaggtcgccgggcgtgcg
gggcgcggcgagaagccgggcaccgtcctcatccagacccacagccccaaggcaccggtg
atgcgtgccttggtcagcggcgatgccgagagcttctatgccgccgagacgcaggcacgg
cgcgaggccggcgcgccgcccttcggccgcttcgccgcgatcatcgtgtcgagcgaggac
aaggacgccgcgctcgaaaccgcccgcctgatcggccgcgccgcgcctcaggtggaggcg
atgcaggtgttcggccccgctcccgccccgctcgccatgctgcgcggccgccaccgtttc
cgcctgctcgtccatgcccgccgcgcgctcgacgttcaggatgtgatccgcgactggctg
ggcggcatcgaatggtccgccaaggtgcgcgtcgtcgtcgatgtggacccctacaacttc
ctctag
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