Sphingomonas koreensis: BRX40_09785
Help
Entry
BRX40_09785 CDS
T04828
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00061
Fatty acid biosynthesis
skr00071
Fatty acid degradation
skr01100
Metabolic pathways
skr01212
Fatty acid metabolism
skr02024
Quorum sensing
skr04146
Peroxisome
Module
skr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BRX40_09785
00071 Fatty acid degradation
BRX40_09785
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BRX40_09785
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRX40_09785
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
skr01004
]
BRX40_09785
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skr04147
]
BRX40_09785
Enzymes [BR:
skr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BRX40_09785
Lipid biosynthesis proteins [BR:
skr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BRX40_09785
Exosome [BR:
skr04147
]
Exosomal proteins
Exosomal proteins of breast milk
BRX40_09785
Exosomal proteins of breast cancer cells
BRX40_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
APR52676
UniProt:
A0A1L6JA02
LinkDB
All DBs
Position
complement(2001379..2003094)
Genome browser
AA seq
571 aa
AA seq
DB search
MSVPEQVGPEQVWRTAYRHPGPWDQPLPPLSMAAAFDDSAQRMGNAPLLDFMGRHYSYAE
TLDGANRVACGLRALGYGPGDRIGLFLPNVPHYVAAYYGILKLGATVVNFSPLYSVEELE
AQVADSGTRLLFTISATALLPTALKVLEASSLERLVVGSVAGALPAAKSLLYRWFKAKEV
AEKPDDPRIIAFSKLIANDGACTTAAIAPETHLALIQYTGGTTGVPKGAMLTHQNLTANA
RQVARLDPELGTTKDKVLGVLPFFHVFANTCVLNRTVITGGEIVMLPRFDAAQALAAITR
TRPLALPGVPTMFQALLDHPNSASTDWSSLKYCISGGAPLPAELKTRFEAATGAKLIEGY
GLSESSGVVSANPYVGEGKSGTIGQPIIATRVRLVDKEDPSKPAPEGEPGEIVVAGPQIM
GGYWDRPETDDSTFCTDATGQKWLRTGDVGQIDEDGFIKIVDRLKDMIAVGGFKVFPKHI
EDVLYRHPAVKEALVVGMPDSYRGETPRAYVALNDDADPVTGNALRDWLNPQLGKHERVD
AVVIRDKLPKTMIGKLSRKDLLIEIAAEASV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccagagcaggttgggcccgagcaggtctggcgtaccgcctatcgtcacccc
ggtccctgggatcagcccttgccgccgctgtcgatggctgccgcgttcgacgattcggcg
cagcgcatgggcaatgccccgctgctcgatttcatgggccggcattacagctatgccgag
acgctcgacggcgccaaccgcgtcgcctgcggcctcagggcgctgggctacggaccgggc
gaccggatcggcctgttcctgcccaacgtcccccattatgtcgcggcctattacggcatc
ctcaagctcggcgcgacggtggtcaatttctcgccgctctattcggtcgaggagctggag
gcccaggtcgcggattcgggcacgcgcctgctgttcacgatcagcgccaccgcgctgctc
cccaccgcgctcaaggtcctggaggcgagcagcctcgaacggctcgtcgtcggttcggtc
gcgggcgcgctgcccgccgccaagtcgctgctctaccgctggttcaaggcgaaggaggtc
gcggaaaagcccgacgatccccgcatcatcgccttctcgaagctgatcgccaatgacggc
gcgtgcacgaccgcggcgatcgcccccgaaacgcatctcgcgctgatccaatataccggc
ggcaccaccggcgtgcccaagggcgcgatgctcacccaccagaacctaaccgccaatgcg
cggcaggtggcgaggctcgatccggaactcggcacgaccaaggacaaggtgctgggcgtg
ctgcccttcttccacgtcttcgccaacacctgcgtcctcaaccgcaccgtcatcaccggc
ggcgagatcgtgatgctcccgcgcttcgacgcggcacaggcgctcgccgcgatcacccgc
acccgcccgctcgcgctgcccggcgtgccgacgatgttccaggcgctgctcgatcacccc
aattcggcctcgaccgactggtcgagcctcaaatattgcatctcgggcggtgcgccgctt
ccggccgaactcaagacccggttcgaggccgcgaccggcgccaagctgatcgaaggctat
ggcctgtccgaaagctcgggcgtggtctccgccaatccctatgtcggcgagggcaagtcg
ggcacgatcggccagccgatcatcgccacgcgcgtccggctggtggacaaggaggatccg
tcgaagccggcgcccgagggcgagccgggcgagatcgtcgtcgccggaccgcagatcatg
ggcggctattgggaccggcccgagaccgacgacagcaccttctgcaccgacgccaccggc
cagaaatggctgcgcaccggcgatgtcggccagatcgacgaagacgggttcatcaagatc
gtcgatcgcctcaaggacatgatcgccgtcggcgggttcaaggtcttccccaagcatatc
gaggacgtgctctaccgccatcccgcggtgaaggaggcgctcgtggtcggcatgcccgat
tcctatcgcggcgagaccccgcgcgcctatgtcgcgctcaacgacgatgccgatccggtg
acgggcaacgcgttgcgcgactggctcaacccccagctcggcaagcatgagcgggtcgat
gcggtggtcatccgcgacaagctgcccaagacgatgatcggcaagctcagccgcaaggat
ttgctgatcgagatcgcggcggaagccagcgtctag
DBGET
integrated database retrieval system
