Sphingomonas koreensis: BRX40_10025
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Entry
BRX40_10025 CDS
T04828
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BRX40_10025
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
skr01007
]
BRX40_10025
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skr03016
]
BRX40_10025
03029 Mitochondrial biogenesis [BR:
skr03029
]
BRX40_10025
Enzymes [BR:
skr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
BRX40_10025
Amino acid related enzymes [BR:
skr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
BRX40_10025
Transfer RNA biogenesis [BR:
skr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BRX40_10025
Prokaryotic type
BRX40_10025
Mitochondrial biogenesis [BR:
skr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BRX40_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
DUF5550
Myb_DNA-bind_8
Motif
Other DBs
NCBI-ProteinID:
APR52717
UniProt:
A0A1L6JA46
LinkDB
All DBs
Position
complement(2057784..2059010)
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AA seq
408 aa
AA seq
DB search
MTEYTSDLLRLLDQRGYIHQVTDAAALDALASKQIVPGYIGFDPTAPSLHVGSLVQIMLL
RRMQQSGHKPIVLMGGGTGKIGDPSFKDEARKLMTDEVIASNVASIKTVFEKFLTFGDGP
TDAVMVDNADWLDKLEYIPFLRDIGKHFSINRMLSFDSVKLRLDREQSLSFLEFNYMILQ
GYDFLELSRRAGCRLQMGGSDQWGNIVNGIELSRRVDGTEVYGVTTPLITTADGGKMGKT
MSGAVWLNEDQLPAFDYWQFWRNTDDRDVGRFLRLFTDLPLDEIARLETLEGAEINEAKK
ILATEATAMCRGREAAEAAAETARKTFEEGSSGESLPTLAVSGEISVVDALIGLGFAASK
GEARRLIKGGGARVDGEKVSDEAAMVTVGAAQVRVSAGKKHHGLLDPA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatacacgtccgatctgcttcgcctgctcgaccagcgtggatatatccaccag
gtcaccgacgccgccgcgctcgacgcgctggccagcaaacagatcgtgcccggctatatc
ggcttcgacccgacggcgccctcgctccacgtcggcagccttgtccagatcatgctgctg
cgccggatgcagcagagcgggcacaagccgatcgtgctgatgggcggcggcaccggcaag
atcggcgacccgagcttcaaggacgaagcgcgcaagctgatgaccgacgaggtcatcgcc
agcaacgtcgcgtcgatcaagacggtgttcgaaaagttcctgaccttcggcgacggcccc
accgacgcggtgatggtcgacaatgccgactggctcgacaagctcgaatacatcccgttc
ctgcgcgacatcgggaagcatttctcgatcaaccgcatgctcagcttcgacagcgtcaag
ctgcggctcgaccgcgaacagtcgctctcgttcctcgaattcaactacatgatcctccag
ggctatgacttcctggagctgtcgcgccgcgccggctgccgcctgcagatgggtggatcg
gaccagtggggcaacatcgtcaacgggatcgagctgtcgcgccgcgtcgacgggaccgag
gtctatggcgtcaccacgccgctgatcaccaccgcagacggcggcaagatgggcaagacc
atgtcgggcgcggtgtggctgaacgaggatcagcttccggccttcgattactggcagttc
tggcgcaacaccgacgaccgcgacgtcggccgcttcctgcgcctgttcaccgatctgccg
ctcgacgagatcgcccggctcgaaacgctcgaaggcgcggagatcaacgaggcgaagaag
atcctcgccaccgaagccaccgcgatgtgccgcggccgcgaggcagcggaagctgcggcc
gaaaccgcgcggaagaccttcgaggaaggcagctcgggcgagtcgctccccaccctcgcg
gtcagcggcgagatcagcgtggtcgacgcactgatcggcctcggcttcgccgcgtcgaag
ggcgaggcccgccgtctgatcaagggcggcggcgcgcgcgtcgatggcgagaaggtgagc
gacgaggcggccatggtcacggttggcgcggcacaggtccgcgtctcggcgggcaagaag
caccacggattgctcgatccggcctga
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