Sphingomonas koreensis: BRX40_11475
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Entry
BRX40_11475 CDS
T04828
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
skr
Sphingomonas koreensis
Pathway
skr03030
DNA replication
skr03430
Mismatch repair
skr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRX40_11475
03430 Mismatch repair
BRX40_11475
03440 Homologous recombination
BRX40_11475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skr03032
]
BRX40_11475
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_11475
Enzymes [BR:
skr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRX40_11475
DNA replication proteins [BR:
skr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRX40_11475
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRX40_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_19
AAA_14
AAA_24
AAA_assoc_2
DUF815
AAA_18
PIF1
Glyco_tranf_2_5
TsaE
Motif
Other DBs
NCBI-ProteinID:
APR52968
UniProt:
A0A1L6JAK8
LinkDB
All DBs
Position
2346041..2347654
Genome browser
AA seq
537 aa
AA seq
DB search
MSDSLGLDEPAQPRDAAYRVLARKYRPQTFAQLIGQDAMVQTLGNAIRRDRLAHAFLLTG
VRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAIAEGRHIDVIEMDAASHTG
VDDVREIIDASRYAAVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPGHVKFLFATTEVQ
KVPVTVLSRCQRFDLRRIPAEKLAAHFAEVVAAEGAEAEPEALAMIARAAEGSARDGLSI
LDQAIAHAGIEGGAVSADAVRTMLGLSDRNAIRALFGRVIEGDAPGALGALRDQYDLGVD
PQAVLKSLLETVHRVTLSKLGNEAVPGQAAEETAALAEWAGKLGFPALHRLWQLLLRGHD
EVIRAALPIEACEMALLRVIHASTLPDPGDLARKIAEGLSVGAAPVAAPSGPAEPPAPRS
LAEALERLEAAHEHHVAARARNLMRVIAFKEPVIEVSSQGLPADLVSDFEQAIRRVLGKR
WSLRVIDAPGAETLAEVKAADAAAERDAVLRSPVVAAAFEAFPEAELIGWTPIRRTA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcccttggcctcgacgaaccggcacagccccgtgatgccgcctatcgcgtg
ctcgcgcgcaaataccggccgcagaccttcgcccagctcatcgggcaggatgcgatggtg
cagacgctgggcaatgcgattcggcgcgaccggctggcgcacgcctttctgctgaccggc
gtgcgcggggtcggcaagacctcgaccgcgcggctgatcgccaaggcgctgaactgcatc
gggccggacggacagggcgggccgacgatcgatccgtgcggggtgtgcgaaccctgccgc
gcgatcgccgaggggcggcatatcgatgtgatcgagatggacgcggcgagccataccggc
gtcgacgatgtccgcgagatcatcgatgcgtcgcgctacgcggcggtgtcggcgcggtac
aagatctacattatcgacgaagtccacatgctgtcgaagaacgcgttcaacgcgctgctc
aagacgctcgaggaaccgccgggccatgtgaagttcctgttcgcgacgaccgaggtccag
aaggtgccggtgacggtgctgtcgcgctgccagcgcttcgatctgcgccgcatcccggcc
gagaagctcgccgcgcatttcgccgaggtggtcgcggccgaaggtgccgaggccgagccc
gaggcgctggcgatgatcgcgcgtgctgccgagggctcggcccgcgacggcctgtcgatc
ctcgatcaggccatcgcgcatgccgggatcgagggcggggcggtgagcgccgatgcggtc
cgcaccatgctcggcctctcggaccgcaacgcgatccgcgcgctgttcgggcgggtgatc
gagggtgacgcgccgggcgcattgggcgcgctgcgcgaccagtatgatctgggcgtcgat
ccccaggcggtgctcaagtcgctgctcgagacggtccaccgcgtgacgctgtcgaagctc
ggcaacgaggcggttccggggcaggccgcggaagagactgcggcgctggcggaatgggct
ggcaagctcggcttcccggcgctccaccggctctggcagctgctgctgcgcggtcatgac
gaggtgatccgcgccgcgctgccgatcgaggcgtgcgagatggcgctgctccgcgtcatc
cacgcctcgaccctgcccgatccgggcgatctggcgcgcaagatcgccgaaggcctgtcg
gtcggcgccgcgccggtggccgcgccctcgggcccggccgaaccgcccgcgccgcggtcg
ctggcggaggcgctggaacggctggaagcggcgcacgagcatcacgtcgccgcgcgcgcg
cgcaacctcatgcgcgtgatcgcgttcaaggagccggtgatcgaagtcagcagccagggg
ctgcccgccgatctggtgagcgatttcgagcaggcgatccgccgcgtgctgggcaagcgc
tggtctctgcgcgtgatcgacgccccgggcgccgagacgctcgccgaagtcaaggccgcc
gatgccgcagcagagcgcgacgcggtgttgcgttcgcccgtcgtcgccgccgcgttcgaa
gcatttcccgaagccgagctgatcggctggaccccaatccggaggaccgcatga
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