Sphingomonas koreensis: BRX40_12105
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Entry
BRX40_12105 CDS
T04828
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
skr
Sphingomonas koreensis
Pathway
skr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRX40_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_9
Cadherin_5
Big_3_5
Big_3_3
SdrD_B
HemolysinCabind
BapA_N
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
APR53072
UniProt:
A0A1L6JAX6
LinkDB
All DBs
Position
2499455..2505331
Genome browser
AA seq
1958 aa
AA seq
DB search
MVREGDDLILRFVDGTTVRLDRYFNCPAETIPEVVFVEPGEGGQWRAALSERSCHLPTDS
SVEALGYSFEPLSSGAAAGGGISGGLLAGLGALLVGGGVAAAAGGGGGGGGPNPGGPPVD
TTPPAAPTVAPTNGRELTGTAEAGATIRIDVNGDGSVDGTTTANASGNWTFTPATPLANG
VTVRVTAADAAGNVSPPTTVTVDAAAPAAPVINPTNGSVIAGTAEAGATVRLDLNNDGTV
DATVTANGTGNWTYTPATPVANGTTVTATATDAVGNVSPPGSVVVDRLAPPAPTINPSRG
DVLTGTAEAGATVRLDLDGDGDVDATATANGSGNWSYTPASPIPNNTTVIATAADAVGNV
SPPASIVIDSLAPAVPTIGDIADNVGSVLGSVSNGGVTDDTTPTLSGTGAEANATITIYN
NGTAIGTTTADGAGAWSFTPAALPPGAHSFTVSATDAAGNASAQSAAYAITIDTSVPAVP
TIDDIADNVGAVLGSVSNGGVTDDTTPTLSGTGAEANATITIYNNGTAIGTTTADGAGAW
SFTPAALPPGAHSFTVSATDVAGNASAQSAAYAITIDTSVPAVPTIGDIADNVGAVLGSV
SNGGVTDDTTPTLSGTGAEANATITIYNNGTAIGTTTADGAGAWSFTPAALPPGAHSFTV
SATDAAGNASAQSAAYAITIDTSVPAVPTIGDIADNVGSVLGSVSNGGVTDDTTPTLSGT
GAEANATITIYNNGTAIGTTTADGAGAWSFTPAALPPGAHSFTVSATDAAGNASAQSAAY
AITIDTSVPAVPTIDDIADNVGSVLGSVSNGGVTDDTTPTLSGTGAEANATITIYNNGTA
IGTTTADGAGAWSFTPAALPPGAHSFTVSATDAAGNASAQSAAYAITIDTSVPAVPTIDD
IADNVGAVLGSVSNGGVTDDTTPTLSGTGAEANATITIYNNGTAIGTTTADGAGAWSFTP
AALPPGAHSFTVSATDAAGNASAQSAAYAITIDTSVPAVPTIGDIADNVGAVLGSVSNGG
VTDDTTPTLSGTGAEANATITIYNNGTAIGTTTADGAGAWSFTPAALPPGAHSFTVSATD
AAGNASAQSAAYAITIDTSVPAVPTIGDIADNVGAVLGSVSNGGVTDDTTPTLSGTGAEA
NATITIYNNGTAIGTTTADGAGAWSFTPAALPPGAHSFTVSATDAAGNASAQSAAYAITI
DTSVPAVPTIGDIADNVGAVLGSVSNGGVTDDTTPTLSGTGAEANATITIYNNGTAIGTT
TADGAGAWSFTPAALPPGAHSFTVSATDAAGNASAQSAAYAITIDTSAPPVPLIDSIVDN
VGPILGTVLTGGTTDDTLPTLNGSGAEANATITIYDNGVAIGTTTADGAGNWSFTPASSL
ASIAHSFTVSSTDAAGNSSVQSAAYTITIDAIPPAAPAITSVTDNIGSVIGTVANGGFTD
DTIPVLAGTGAEPNGLVRIFDNGVLIGTTTANGAGAWSFTPGAPLTEASHSFTVTTRDAV
GNESLPSAAHVITVDLTAPTATIAITGISDDTGALGDWQTDDTSPTISGTLSAALGASER
VEISLDGGATWAQATVSGTTWFHGPGTIGLGAHNISVRVIDAAGNIGNSANQAITVTNVN
VGPIVQATSASLLGLISAEALGLLDLSGQSLVAVDPDGNLSSVVVRYAPLLALNLGAYTL
TGSAQLAAELGLQVNIVNDPGVLGLIAPTSTMTITKLGGGAIDNLAINEFLKSVHFNQDL
TLVGLQVLGSTTITGTDTDGVSSTSAVGTLLDLSLINMNGNPTLIEGDVSANTLNGSALN
ERIYGYGGSDILHGGGGTDLIRGGAGADEIYGDGGNDVLIFDAADVIIDGGTGTDILLMD
SGTGLVATIDAATNIRNIESIHLGSGDGGRSIAIDEAGVLAATDSNRQLIVTGESNDSVS
LTGAVYQGQTLINGHAYNQYVLGSVTVIVEDAVVVTVI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagagggggatgacctcatcttgcggttcgtcgacggcacgacggtgcggctc
gatcgctatttcaactgtcccgctgaaacgatccctgaagtggtctttgtcgagccaggg
gagggaggacaatggcgcgctgcgttgagcgagcgttcgtgtcatctccctaccgacagc
tccgtagaggcgcttggctattcgttcgaacctttgtcatcgggtgcggctgctggcggc
ggcattagcggcggactgctcgccggattgggcgcgttgcttgttggcggcggcgtggcg
gccgcggcgggcggcggtggcgggggcggcggccccaaccccggcggcccgccggttgat
acgacgcctcctgcggcacccaccgttgcgccgaccaatggccgggaactgacgggcacg
gcagaggccggtgcgaccatccgcatcgacgtgaatggcgacggaagcgtcgatgggacg
accacggccaatgcatcggggaactggaccttcaccccggccaccccgcttgcaaatggt
gtgacggtacgggtgacggcggcagacgccgccggcaacgtctcgccgccgaccaccgtc
accgtcgatgctgcggcgccggctgcgcccgtcatcaatccaaccaacggcagcgtgatc
gcgggtacggcggaggccggcgcgacggttcgcctcgatctcaacaatgacggcactgtg
gatgccacggtgacggcaaacgggacggggaactggacctatacgcccgcgaccccggtt
gccaacggcaccacggtgaccgcgacggcgacggatgccgtcggcaatgtctcgcctcct
gggagcgttgtggtcgatcgccttgcgccgcctgccccgacgatcaatcccagccgcgga
gacgtgctgaccggcacggccgaagcaggcgcgaccgtcaggcttgatctcgatggggat
ggcgatgtcgacgcgaccgccaccgcgaacggctccggtaactggagctatacacccgct
agccccatccccaacaatacgacggtgatcgcgacggcggccgatgccgtaggcaatgta
tcgccacccgccagcatcgtgatcgattccctggcgcccgcggtgccgacgatcggcgat
atcgccgacaatgtcgggtcggtgctgggcagcgtgagcaatggcggcgtcaccgacgat
accaccccgacgctgtcggggacgggtgccgaggccaatgccacgatcaccatctacaac
aacggcacggcgatcggcacgaccaccgccgatggcgcgggggcgtggagcttcacgccc
gcggcactgccgccgggtgcgcacagcttcaccgtctcggcgaccgatgccgcgggcaat
gccagcgcgcagtcggctgcctatgcgatcaccatcgacaccagcgtccccgcggtgccg
acgatcgatgacatcgccgacaatgtcggggcggtgctgggcagcgtgagcaatggcggc
gtcaccgacgacaccaccccgacgctgtcggggacgggtgccgaggccaatgccacgatc
accatctacaacaacggcaccgcgatcggcaccaccaccgccgatggcgcgggggcgtgg
agcttcacgcccgcggcgctgccgccgggcgcgcatagcttcaccgtctcggcgaccgat
gtcgcgggcaatgccagcgcgcagtcggctgcctatgcgatcaccatcgacaccagcgtc
ccggcggtgccgacgatcggcgatatcgccgacaatgtcggggcggtgctgggcagcgtg
agcaatggcggcgtcaccgacgacaccaccccgacgctgtcggggacgggtgccgaggcc
aatgccacgatcaccatctacaacaacggcaccgcgatcggcaccaccaccgccgatggc
gcgggggcgtggagcttcacgcctgcggcattgccgccgggtgcgcacagcttcaccgtc
tcggcgaccgatgccgcgggcaatgccagcgcgcagtcggcggcctatgcgatcaccatc
gacaccagcgtccccgcggtgccgacgatcggcgacatcgccgacaatgtcgggtcggtg
ctgggcagcgtgagcaatggcggcgtcaccgacgacaccaccccgacgctgtcggggacg
ggtgccgaggccaatgccacgatcaccatctacaacaacggcacggcgatcggcaccacc
accgccgatggcgcgggggcgtggagcttcacgcctgcggcactgccgccgggtgcgcac
agcttcaccgtctcggcgaccgatgccgcgggcaatgccagcgcgcagtcggctgcctat
gcgatcaccatcgacaccagcgtccccgcggtgccgacgatcgatgacatcgccgacaat
gtcgggtcggtgctgggcagcgtgagcaatggcggcgtcaccgacgacaccaccccgacg
ctgtcggggacgggtgccgaggccaatgccacgatcaccatctacaacaacggcacggcg
atcggcaccaccaccgccgatggcgcgggggcgtggagcttcacgcctgcggcactgccg
ccgggtgcgcacagcttcaccgtctcggcgaccgatgccgcgggcaatgccagcgcgcag
tcggctgcctatgcgatcaccatcgacaccagcgtcccggcggtgccgacgatcgatgac
atcgccgacaatgtcggggcggtgctgggcagcgtgagcaatggcggcgtcaccgacgac
accaccccgacgctgtcggggacgggtgccgaggccaatgccacgatcaccatctacaac
aacggcacggcgatcggcaccaccaccgccgatggcgcgggggcgtggagcttcacgcct
gcggcactgccgccgggtgcgcacagcttcaccgtctcggcgaccgacgccgcgggcaat
gccagcgcgcaatcggctgcctatgcgatcaccatcgacaccagcgtcccggcggtgccg
acgatcggcgacatcgccgacaatgtcggggcggtgctgggcagcgtgagcaatggcggc
gtcaccgacgacaccaccccgacgctgtcggggacgggtgccgaggccaatgccacgatc
accatctacaacaacggcacggcgatcggcaccaccaccgccgatggcgcgggggcgtgg
agcttcacgcctgcggcactgccgccgggtgcgcacagcttcaccgtctcggcgaccgac
gccgcgggcaatgccagcgcgcaatcggctgcctatgcgatcaccatcgacaccagcgtc
ccggcggtgccgacgatcggcgacatcgccgacaatgtcggggcggtgctgggcagcgtg
agcaatggcggcgtcaccgacgataccaccccgacgctgtcggggacgggcgccgaggcc
aatgccacgatcaccatctacaacaacggcacggcgatcggcaccaccaccgccgatggc
gcgggggcgtggagcttcacgcctgcggcattgccgccgggtgcgcacagcttcaccgtc
tcggcgaccgatgccgcgggcaatgccagcgcgcagtcggcggcctatgcgatcaccatc
gacaccagcgtccccgcggtgccgacgatcggcgacatcgccgacaatgtcggggcggtg
ctgggcagcgtgagcaatggcggcgtcaccgacgacactaccccgacgctgtcggggacg
ggtgccgaggccaatgccacgatcaccatctacaacaacggcacggcgatcggcacgacc
accgccgatggcgcgggggcgtggagcttcacgcctgcggcactgccgcccggtgcgcac
agcttcaccgtctcggcgaccgacgccgcgggcaatgccagcgcgcagtcggctgcctat
gcgatcaccatcgacaccagcgcgccgccggtgccgctgatcgactcgatcgtcgataat
gtcgggccgatactgggcaccgtactcaccggcggtacgaccgatgacacgctaccgacg
ctcaacgggtcgggcgccgaggccaatgcgaccatcaccatttatgacaatggcgtcgcg
atcggaacgacgacggcggatggtgcgggtaactggagctttacgccagcttcgtctttg
gcatcgatcgcgcacagcttcacggtctcgtcaaccgatgcagccggcaattcgagcgtg
caatcagcggcctacacgatcacgatcgacgcgatcccgccggcagcaccggcgatcacg
agcgtaaccgacaatatcgggtcggtcatcggcactgtcgcgaatggcggctttacagac
gacaccattccggtgcttgccgggacgggtgccgaacccaatggcctggtacgtattttt
gacaatggtgtgctgatcggcacgacgacggccaatggtgcgggagcctggagctttacg
ccgggcgcgccgctcaccgaagcgagccacagctttacggtaacgacgcgggatgcggtc
ggcaacgaaagcctgccgtctgcagcacatgtcatcaccgtcgacctcaccgctccgacc
gcgaccatcgccatcaccggcatttcggatgataccggcgcgctgggcgactggcagacc
gacgacacttctccgaccatcagcgggacgctgagtgcagcgcttggtgccagtgagcgc
gtcgagatcagccttgatggcggcgcgacatgggcgcaggcgacggtttcgggaaccaca
tggttccacggccccggtacgatcggtctgggcgcgcacaatatcagcgtgcgggtcatc
gatgccgccggcaacatcggcaacagtgcaaaccaggcgatcaccgtcacaaatgtgaat
gtcgggccgatcgttcaggcgaccagcgcttccttgctcggactgatcagcgccgaagca
ctcggattgctcgatcttagcggccaatccctcgtcgcagtcgatcccgacggcaatctg
tcgagtgtcgtggtgcgctacgctccgctgctggcgctcaatctcggcgcctatacgctt
accggatcggcgcaactggcggccgagctcggactgcaggtcaacatcgtcaacgatccg
ggcgtgctcggtctgatcgccccgacttcgacgatgaccatcaccaaattgggtggcggc
gcgatcgacaatctcgcgatcaacgagttcctgaaatcggttcatttcaatcaggatctg
acgctcgtcggcctgcaggttcttggctctacgacgataacaggtaccgataccgacggc
gtttcgagcacgtccgcagtcggcacgctgctcgatctcagcctgatcaatatgaacggc
aacccgacgctgatcgagggcgatgtcagcgccaatacgctcaacggctcggcgctgaac
gagcgcatctatggctatggcggcagcgatatcctccacggcggcggcggcaccgatctg
atccggggcggcgccggtgccgacgaaatctacggcgatggcggcaacgacgtgctgatc
ttcgatgcggcggatgtcatcatcgacggcggaacgggaaccgatatcctgttgatggat
agcggtaccggtctggtcgcgacgatcgatgctgcaaccaatatccgtaatatcgagagc
atacatcttggcagtggcgatggcgggcggagcatcgcgatcgacgaggccggggttctc
gccgccaccgacagtaaccgtcagctcatcgttacaggtgaaagtaatgacagcgtcagc
ctgactggtgcggtctatcaggggcagacgttaatcaacggccacgcctacaaccagtac
gtactgggaagtgtcacggtgattgttgaggatgccgttgttgttaccgttatctag
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