Sphingomonas koreensis: BRX40_12340
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Entry
BRX40_12340 CDS
T04828
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skr02000
]
BRX40_12340
Transporters [BR:
skr02000
]
Other transporters
Pores ion channels [TC:
1
]
BRX40_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APR53112
UniProt:
A0A1L6JB12
LinkDB
All DBs
Position
complement(2567406..2569556)
Genome browser
AA seq
716 aa
AA seq
DB search
MRYIYLLGAATLALTPSAFAQTASAPSPAKSAQTADEEIVITAPFRQAEDDLLQGTSVVT
GEALQRDLRPTIGETLARQPGVSATSFGPSASRPILRGFQGERIRVLTDGIGAIDVSNTS
VDHAVVIDPLLAERVEVLRGPSALLFGSSAIGGVVNVIDTRIPRSVPEKGYRVNAIGTYG
SAANERSIGGAADVALGGKFVLHADGSYTKTDDLKIPGYVLSGPARAQALATAAQPQPAP
DPDAEEPIDFAANAALRGRLPNSASETWTAGVGASIITDTGSLGVSYSHYDSLYGIPVRY
ATELGQEQEAPRLDIAQDRFDLRGEVETGGGFLERIRARAGYASYRHFELEDTGEIATRF
YNKGLEGRLELVQAEHDGWRGVSGVQYFNRRFDVQGEEAFLPKNRTGQFGVFTLQQIDLG
QFRAEGGLRYERTQLTADTLVDDLRFFSGKRSFDAVSGSVGASLGVAPGVRIGLNLSRTE
RAPSGEELFANGAHAGTQAYELGNPDFKLEKSWGIEATVHANGDGFHFDASAYYNWFSNY
IFESQVAQSVCQAAADPSGREVEFPCFQFQQADARYYGFEADASVRLARIGGYAVNLDLL
GDYVHANVVDRGPVPRIPPLRLLGGLELQSDRLTARAEVEHVFEQDRIAAFETPTSDYTL
VNASIAFRPWGKDSKTSILLSANNIFDVEARRHTSFLKDFAPLAGRDFRASLRIGF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacatctacctgctcggcgcagcgacgcttgcgctcaccccgtccgccttcgcg
cagaccgcgagcgcgccctcccccgccaaatctgcacaaaccgccgacgaggaaatcgtc
atcaccgcccctttccggcaagcggaggacgatctgctgcaaggcacttcggtggtgacc
ggcgaagcgctgcagcgcgacctgcgcccgacgatcggcgagacgctggcacgccagccg
ggcgtgtccgcgacctccttcggcccgagcgcgtcacgtccgatcctgcgcggctttcag
ggagagcgcatccgcgtgctgaccgacggcatcggcgcgatcgacgtgtcgaacacatcg
gtcgatcacgccgtcgtcatcgatccgctgctggccgaacgcgtcgaggtgctgcgcggt
ccctcggcgttgctgttcggctcgtcggcgatcggcggcgtcgtcaacgtgatcgacacc
cgcattccgcgcagcgtgcccgagaagggctaccgggtgaacgcgatcggcacctatggc
tcggccgcgaatgagcgctcgatcggcggtgcggccgatgtcgcgctcggcggcaagttc
gtgctgcatgccgacgggtcctacaccaagaccgacgacctcaagattcccggctatgtc
ctgtccggtcccgcccgcgcacaggcgctggcaaccgccgcgcagcctcagcccgcgccg
gatcccgacgcggaggagccgatcgacttcgccgccaacgcggcgctgcgcggccggctg
cccaattcggcgagcgagacctggaccgccggtgtcggcgcgtcgatcatcaccgacacc
ggcagcctcggcgtgtcgtacagccactatgacagcctctatgggattcccgtgcgctat
gcgacggaactgggccaggagcaggaagccccccggctcgatatcgcgcaggaccgcttc
gacctgcgcggcgaagtggaaaccggcggcggcttcctcgagcgcattcgcgcacgcgcg
ggctatgccagctatcgccacttcgaactcgaggacaccggagagatcgcgacgcgcttc
tacaacaaggggctggagggtcggctcgagctggtgcaggccgagcatgacggctggcgt
ggcgtgtcgggcgtgcagtatttcaatcgccgcttcgacgtgcagggcgaggaagcgttc
ctgcccaagaaccggacggggcagttcggcgtcttcacgctccagcagatcgacctcggc
cagttccgtgccgaaggcggactgcgctacgaacgcactcagctgaccgccgataccctg
gtcgacgatctgcgcttcttctcgggtaagcgcagtttcgacgcggtgtcgggctcggtc
ggcgcttcgctcggcgttgcgccgggggttcgcatcggcctcaacctctcgcgtaccgag
cgagcgccctctggcgaggaactcttcgccaatggcgcgcatgccggaacgcaggcctat
gaactcggcaaccccgatttcaagctcgaaaagtcgtggggcatcgaagccacggtccac
gccaatggcgacggcttccacttcgacgcctcggcctattacaattggttctccaactat
atcttcgagagccaggtcgcccagagcgtctgccaggcggccgcggatcccagcggccgg
gaagtcgagttcccctgcttccagttccagcaggccgatgcccgctactacgggttcgag
gcggacgcgtcggtgcggctggcccgcatcggcggctatgccgtgaacctcgacctgctc
ggcgactatgttcacgccaatgtcgtcgatcgggggccggtgccgcgcattccgccgctt
cgcctgctgggcgggctcgagctgcagtccgacaggctcaccgcgcgcgcggaggtcgag
catgtgttcgaacaggaccgcatcgccgcgttcgaaacaccgaccagcgactatacgctg
gtcaacgcatcgatcgcgttcaggccgtggggcaaggacagcaagacgagcatcctgctc
agcgccaacaacatcttcgatgtcgaggcgcgccgtcacacgagcttcctcaaggacttc
gcaccgctcgccgggcgcgatttccgcgcgagcctgcgcatcggcttctag
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