Sphingomonas koreensis: BRX40_13535
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Entry
BRX40_13535 CDS
T04828
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00970
Aminoacyl-tRNA biosynthesis
skr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BRX40_13535 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
skr03029
]
BRX40_13535 (gatB)
Enzymes [BR:
skr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
BRX40_13535 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
BRX40_13535 (gatB)
Mitochondrial biogenesis [BR:
skr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BRX40_13535 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
APR53314
UniProt:
A0A1L6JBJ8
LinkDB
All DBs
Position
2804240..2805700
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AA seq
486 aa
AA seq
DB search
MSESAYRIKGATGEWEVVIGLEVHAQVTSNAKLFSGAATEFGAEPNTQVSLIDAAMPGML
PVPNRECIRQAVRTGMAIDAQINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGEIEIE
VDGETKTIGVERIHVEQDAGKLMHDQHPRLSYVDLNRSGVALMEIVSKPDMRSPAEAGAY
LSKLRSILRYVGSCDGNMDQGSMRADVNVSVRRPGEEFGTRTETKNVNSVRFVMQTVEIE
ALRQIDVIESGGKIVQETRLFDPDKGETRSMRSKEDAHDYRYFPDPDLLPLELDDAFLEE
CRGSLPELPDAKRARYLALGITPYNAGVLTAEVESARYFDALLDAGAKGPAAANWVTSEL
FGALNKLGKDIENSPVSPAQAAELLGLVADGTISGSLAKQVFEIMLETGGSPAAIVEERG
LKQTSDTGAIEAVIAEVLAKNPGQLEQYRGGKEALFGFFVGQTMKAMGGKANPGVVNELL
KKALNG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatccgcatatcgcatcaaaggcgcaaccggcgagtgggaggtcgtgatcggc
cttgaggtccacgcccaggtcacgtccaacgccaagctcttctcgggcgccgcgaccgag
ttcggcgccgagccgaacacgcaggtgtcgctgatcgacgcggcaatgcccggcatgctc
ccggtgcccaaccgcgagtgcatccgtcaggcggtgcgcaccggcatggcgatcgatgcg
cagatcaacaaatggtcgcgcttcgaccgcaagaattacttctacgccgatctgccgcag
ggctaccagatcagccagctctatcacccgctggtgggagagggtgagatcgagatcgag
gtggacggcgaaaccaagaccatcggcgtcgagcgcatccatgtcgagcaggatgccggc
aagctgatgcacgaccagcatccgcgcctctcctatgtcgacctcaaccgttccggcgtc
gcgctgatggagatcgtgtcgaagcccgacatgcgctcgccagcggaggctggggcgtat
ctgtcgaagctgcgttcgatcctgcgctatgtcggctcgtgcgacggcaatatggatcag
ggctcgatgcgcgcggacgtcaatgtcagcgtgcgccgtccgggcgaggaattcggcact
cgcaccgagaccaagaacgtcaactcggttcgcttcgtcatgcagacggtggagatcgag
gcgctgcgccagatcgacgtgatcgagagcggcggcaagatcgtccaggaaacccgcctg
ttcgatccggacaagggcgagacgcggtcgatgcgttccaaggaggacgcgcacgactat
cgctatttcccggacccggatctgctcccgctcgagctggacgatgcgttccttgaggaa
tgccgcggctcgctgcctgagctgcctgacgccaagcgggcgcgctacctcgcgctcggc
atcaccccgtacaatgccggcgtgctgaccgcagaggtcgaatccgcgcgctatttcgat
gcgctgctcgatgccggcgccaaggggccggcggcggccaactgggtcacttccgagctg
ttcggcgcgctcaacaagctgggcaaggatatcgagaacagtccggtctcgcccgcgcag
gcggcggaactgctcggcctcgtcgccgacggcacgatttcgggcagcctcgccaagcag
gtgttcgagatcatgcttgaaaccggcggcagcccggcggcgatcgtcgaggaacgcggt
ctcaaacagacctcggacaccggcgcgatcgaggcggtgatcgccgaggtgctggccaag
aaccccggccagctcgaacagtatcgcggcggcaaggaggctttgttcggtttcttcgtc
ggccagacgatgaaggcgatgggcggcaaggccaatccgggcgtggtgaatgagctgctg
aagaaagcactcaacggctga
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